| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0126 |
|---|
| Symbol | |
|---|
| ID | 3579743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 148982 |
|---|
| End bp | 149722 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637683809 |
|---|
| Product | putative integral membrane protein |
|---|
| Protein accession | YP_288187 |
|---|
| Protein GI | 72160530 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0160124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGTC TCGATGTCGC TGTCATCGCG CTGGCCGCTG GAACGGGCGC GCTCGCGGTC
GGAGACGGCC GGTCGCCCGC AGAACGGCGG CTCGCCGCCT TGTCGGCCCC TGCCCTACGC
CGCCCACCCC GGCTTCTGCC CCGGCTTCCC CGCATGCTCG CCGCTGCTGC CGTACTCGCG
GCCTGCTGGG CGCTGGGCGG GGCAGGACTC GGCTTGTTCG GGAGCGCACT CCTCGCCGGG
TTCGTGGTGT GGCGGCGGAA ACGGGCCGCA GCGTCCCCAC CGTCCGCCGG GCGGGACACG
GAGATCACGG CCGTGCTGCC CCTGGCCCTG GACCTGTTGG CGGCCGGGCT GCGCGCGGGA
GCACACCCCA CCGACATGGT GGCGGCGGTA GCCCAGGCTC TCGGCGGGCC GCTCGGTACC
GCGCTGGACG GGGTGGCCCG GCAGTTACGG CTCGGCGCCG ATCCGGCGCG CGCCTGGCAG
AGTCTGCACG CCCCCGCAGA GCTGGCCGCG GTAGGCCGGG CCCTGGCCCG GGCAAGCCAC
ACTGGCGCCC CACTGGCCGA CGTGGTGGAG TCCCACGCCG CCGACTGCCG CCGTACCGCC
CGCGCGACAG CCCTCGAGCT GGCCCACCGC ACCGGGGTAG CCGTCGTCAT CCCCCTGGGT
GTGTGCTTTC TGCCCGCGTT CGTCCTCCTC GGCGTGGTGC CCCTGGCCGC GGGCCTCGTG
TCTGGTCTGG TCCTTCCCTG A
|
|---|
| Protein sequence | MTGLDVAVIA LAAGTGALAV GDGRSPAERR LAALSAPALR RPPRLLPRLP RMLAAAAVLA
ACWALGGAGL GLFGSALLAG FVVWRRKRAA ASPPSAGRDT EITAVLPLAL DLLAAGLRAG
AHPTDMVAAV AQALGGPLGT ALDGVARQLR LGADPARAWQ SLHAPAELAA VGRALARASH
TGAPLADVVE SHAADCRRTA RATALELAHR TGVAVVIPLG VCFLPAFVLL GVVPLAAGLV
SGLVLP
|
|---|
| |