Gene Tfu_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0108 
Symbol 
ID3579725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand+ 
Start bp131789 
End bp132292 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content66% 
IMG OID637683791 
Producthypothetical protein 
Protein accessionYP_288169 
Protein GI72160512 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.229292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAA TTGCCTGGAG TTCCCCGGAA GGGGCCTCTA GCATCCCTGG CATGTCCGAA 
CTAAAGACCC GGCTGCAAGC CGACCTTACC GCTGCGATGA AGGCACGGGA CGCTGTGCGG 
ACTCGGGCGC TGCGCATGCT GCTCACCGCG ATCTCCAACG AGGAGGTGTC GGGGAAGTCC 
GCCCGTGAGC TCAGCGACGA CGAGATCATC AAGGTGATCA CGAAGGAAGT GAAGAAGCGT 
CGCGAGGCCG CGGAGGCTTT CGAGCAGGGT GGGCGCGCGG ACCGGGCAGC GGACGAGCGT 
GCCGAAGGCG AGGTGCTGTC CGAGTATTTG CCGGAGCAGC TCAGCGACGA AGAGCTGGCT 
GATCTGGTTC GGGCGGCGAT CGCGGAGGCC GGGGTGAGCG ACGTCAAGGG GATGGGCGCG 
GTGATGAAGC TGCTCACTCC CCGGGTTGCG GGGCGTGCTG AGGGCCGCCG GGTCGCTGAC 
GAGGTGCGCC GCCAGTTGTC GTGA
 
Protein sequence
MGKIAWSSPE GASSIPGMSE LKTRLQADLT AAMKARDAVR TRALRMLLTA ISNEEVSGKS 
ARELSDDEII KVITKEVKKR REAAEAFEQG GRADRAADER AEGEVLSEYL PEQLSDEELA 
DLVRAAIAEA GVSDVKGMGA VMKLLTPRVA GRAEGRRVAD EVRRQLS