Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0104 |
Symbol | |
ID | 3579683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 126888 |
End bp | 127331 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637683786 |
Product | putative integral membrane protein |
Protein accession | YP_288165 |
Protein GI | 72160508 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.489951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGG ACCGATACCA CGGACCAGTC CTCGCTCTAT TCCGCATAGT CGTAGGCCTG ATGTTCCTCT GCCACGGAGT GGCCTCCCTG TTCGGCGTAC TCGGCGGCAA CCAAGGCACC GGGCAGGCCG TGGAATTCGC CTCCTGGCCG GGATGGTGGG CCGCCCTCAT CCAGCTCGTC TGCGGCGCCC TCGTCCTCCT CGGCCTGTTC ACCCGGCCCA GCGCCGCCCT CGCCTCCGGC TCCATGGCGT ACGCCTACTT CGTCGTGCAC CAGCCCCACG CGCTCCTGCC CCTCAACAAC GGGGGAGAAC TCGCCGCCAT GTACTGCTGG GCTTTCTTCC TCATCGCCAT CCTCGGACCC GGAGCCTGGG CGCTCGACCA CTTCATCCTC CGCCGTTCCA GCGGCACACA GCAGCGGCTG ACAGCGGGCA CCTCCGCGGG ATAA
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Protein sequence | MNLDRYHGPV LALFRIVVGL MFLCHGVASL FGVLGGNQGT GQAVEFASWP GWWAALIQLV CGALVLLGLF TRPSAALASG SMAYAYFVVH QPHALLPLNN GGELAAMYCW AFFLIAILGP GAWALDHFIL RRSSGTQQRL TAGTSAG
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