| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0100 |
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| Symbol | |
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| ID | 3579679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 121094 |
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| End bp | 123427 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637683782 |
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| Product | RNA binding S1:resolvase, RNase H-like fold |
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| Protein accession | YP_288161 |
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| Protein GI | 72160504 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGACGT CCATTCACCA GCGGATCGCC GAGGAGCTCG GGGTACGCGA ACGGCAGGTA
CGGGCCGCAG TCGAACTGCT TGACGACGGC GCAACCGTGC CGTTCATCGC CCGCTACCGC
AAAGAAGTCA CGGAGATGCT CGACGACGCC CAGTTGCGGG CGATCGAAGA GCGGCTGCGC
TACCTGCGGG AACTGGAGGA ACGCCGCACC GTCATCCTGG AGTCGATCAA GGCGCAGGGC
AAACTCACGC CCGAACTCGA AGCCGCGATC ATGGCCGCCG ACTCCAAGGC ACGCCTGGAA
GACATCTACC TCCCCTACAA GCCGAAGCGC CGCACCAAGG CGCAGATCGC GCGCGAAGCC
GGACTGGAGC CCTTGGCGGA CGCGCTGCTC AACGACCCCT CCCGCGACCC GCACGACCAG
GCCGCCGCCT ACGTTGATGC GGACAAGGGG GTCGCGGACA CGGCTGCCGC ACTGGAAGGC
GCCCGCGCCA TCCTGGTGGA ACGGTTCACC GAAGACGCCG ACCTCATCGG TGAACTGCGG
GAACGCATGT GGCAGCGGGG CCGTCTCGTC TCGCGGGTGC GGGAAGGCAA GGAAGAAGTC
GGCGTGAAGT TCGCCGACTA CTTCGACTTC GCCGAAGCGT TCACCACCCT GCCCTCCCAC
CGGGTCCTGG CTCTGTTCCG CGGTGAGAAG GAAGAAGTCC TCGACCTCAC CCTGGAACCG
GAAGAACCGG CAGAAGACCC GAGAGCCCGC AGCAGCTACG AGGTCCGCAT CGCCCAGCAC
TTCGGTATCG CCGACCAGGG CCGTCCCGGG GACCGCTGGC TGTTGGACAC GGTCCGCTGG
GCGTGGCGCA CCCGCATCCT CGTCCGTCTC GACATCGACC TGCGCTCCCG CCTCTGGCAG
GAAGCCGAAG ACGAAGCAGT CCGGGTGTTC GCCGCCAACC TGCGCGACCT GCTGCTGGCC
GCGCCCGCCG GCACCCGGCC CACCATCGGT CTCGACCCGG GCCTGCGCAC CGGGGTGAAG
GTCGCTGTCG TGGACGGCAC CGGCAAAGTG GTGGACACCG CGACGATCTA CCCGCACGAA
CCGCAGAAGC GCTGGGACGA GTCCATCGCC GTCCTGGCGG CGCTCGCCCA GAAGCACCGG
GTGGAACTGG TCGCGATCGG TAACGGAACC GCGTCCCGCG AAACCGACCG TCTCGCCGCT
GACCTGATCA AACGCCACCC GGAGCTGAAG CTCACCAAGG TGATGGTGTC GGAGGCCGGG
GCGTCGGTGT ATTCGGCGTC CGCCTACGCT TCCCAGGAGC TTCCTGACTT GGACGTGTCG
CTGCGCGGCG CTGTCTCTAT TGCACGACGA CTCCAGGACC CGCTCGCCGA GCTGGTTAAA
ATCGACCCCA AGTCAATCGG GGTCGGCCAA TACCAGCACG ACGTGTCCGA GGTGAAACTG
TCCCGCTCCT TGGACGCGGT CGTGGAAGAC TGCGTGAACG CGGTCGGCGT GGACGTGAAC
ACCGCGTCGG TACCGCTGCT CAGCCGCGTT TCCGGTATCA CGGCGAGCCT GGCCCAGAAC
ATCGTCGCCT ACCGTGACGC CAACGGGCCG TTCCGTACCC GTGCCCAACT GCGGGAAGTG
CCGCGGTTGG GACCGAAAGC GTTCGAACAG TGCGCGGGTT TCCTGCGGAT TCCTGACGGG
GACGACCCGT TGGACTCTTC AAGCGTCCAC CCGGAGGCGT ATCCGGTGGT GCGGCGCATC
CTCGAGGCGA CCGGCCGGGA TATCCGGGCG CTCATCGGCG ACACGGACAC GCTGCGCTCG
CTACGCCCCG ACGACTTCGT GGACGAGCGG TTCGGTCTGC CCACGGTGAC CGACATCCTC
GCGGAGTTGG AGAAACCGGG CCGGGACCCG CGCCCCGAGT TCCAGACCGC AGCATTCCGG
GACGGGGTGG AGGACATCAC CGACCTGGAA CCGGGCATGG TGCTGGAGGG CGTGGTCACC
AACGTGGCGG CGTTCGGCGC GTTCGTGGAC GTGGGAGTGC ACCACGACGG CCTGGTGCAC
GTCTCAGCGA TGTCGAAGAG TTTCGTCAAA GACCCGCGGG ACGTGGTCAA GCCCGGCGAC
ATCGTGCGCG TCAAAGTGCT GGACGTGGAT GTGCGTCGCA AGCGGATCTC GCTGACTCTC
CGCTTGGACG ATGAAGTGGA CCAGCGCAGT GGGGAGAACA ACCGCTCCGG CGGGGAGCGC
CGGGAGCGGG GTGCGCCGCG GCGCGGGGAC CAGCGGCGGC AGCGCGGCGG CCGCGGCGAG
CAGCAGCCCA TGGGGGCGAT GGCGGAAGCG CTGCGCCGCG CAGGCCTGGT GTAG
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| Protein sequence | MTTSIHQRIA EELGVRERQV RAAVELLDDG ATVPFIARYR KEVTEMLDDA QLRAIEERLR
YLRELEERRT VILESIKAQG KLTPELEAAI MAADSKARLE DIYLPYKPKR RTKAQIAREA
GLEPLADALL NDPSRDPHDQ AAAYVDADKG VADTAAALEG ARAILVERFT EDADLIGELR
ERMWQRGRLV SRVREGKEEV GVKFADYFDF AEAFTTLPSH RVLALFRGEK EEVLDLTLEP
EEPAEDPRAR SSYEVRIAQH FGIADQGRPG DRWLLDTVRW AWRTRILVRL DIDLRSRLWQ
EAEDEAVRVF AANLRDLLLA APAGTRPTIG LDPGLRTGVK VAVVDGTGKV VDTATIYPHE
PQKRWDESIA VLAALAQKHR VELVAIGNGT ASRETDRLAA DLIKRHPELK LTKVMVSEAG
ASVYSASAYA SQELPDLDVS LRGAVSIARR LQDPLAELVK IDPKSIGVGQ YQHDVSEVKL
SRSLDAVVED CVNAVGVDVN TASVPLLSRV SGITASLAQN IVAYRDANGP FRTRAQLREV
PRLGPKAFEQ CAGFLRIPDG DDPLDSSSVH PEAYPVVRRI LEATGRDIRA LIGDTDTLRS
LRPDDFVDER FGLPTVTDIL AELEKPGRDP RPEFQTAAFR DGVEDITDLE PGMVLEGVVT
NVAAFGAFVD VGVHHDGLVH VSAMSKSFVK DPRDVVKPGD IVRVKVLDVD VRRKRISLTL
RLDDEVDQRS GENNRSGGER RERGAPRRGD QRRQRGGRGE QQPMGAMAEA LRRAGLV
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