Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0084 |
Symbol | |
ID | 3579719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 106919 |
End bp | 107650 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637683766 |
Product | hypothetical protein |
Protein accession | YP_288145 |
Protein GI | 72160488 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGAGC AGCTCTCCCC CATGCCCGAA GACTGGCAGC GCGCCCTCGC CGTCGTCGCC CACCCCGACG ACCTGGAATA CGGGGCTGCC GCAGCGATCG CCGCCTGGAC TGACGCAGGC AAAGAGGTGA GCTACCTGCT GGCCACCCGC GGTGAGGCGG GCATCGACGG CATCCACCCG AGCAAGGCGG CCCCGCTGCG GGAACGGGAG CAGATCGCCA GCGCTGCCGT TGTCGGCGTC ACCACCGTAG AGTTCCTCGA CTACCGCGAC GGGGTGATCG AATACGGTCT CCCCCTGCGC CGGAATATCG CCGCGGCGAT CCGGCGGCAC CGCCCCGAAC TCGTCATCAC CCTCAACCAC CGCGACACCT TCCACGGCGG CTTCTGGAAC ACCCCTGACC ACAAGGCGGT AGGCCGGGCC ACGCTCGACG CTGCCACAGA CGCGGGCAAC CGGTGGATCT TCCCGGAACT CGTCGACCAG GGACTGGAGC CGTGGAACGG GGTGCGCTGG GTTGCCGTGG CGGCCTCGCC CCAGCCCACG CACGCAGTGG ACGCCACCCC GGGCTACGAG CGCGCTGTCC GCTCCCTGCT GGAGCACCGC GCCTACATCG AAGGGCTCAC CGACGAAGAC CCGGAAACCT ATGTGCGGTC CTTCCTGGAC GAGACCTTGT CCGCCAACGC CCCGCGGTTC GGCGGCCGAC TTGCGGTCAC CTTCGAACTG TTCCCCCGCT AA
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Protein sequence | MTEQLSPMPE DWQRALAVVA HPDDLEYGAA AAIAAWTDAG KEVSYLLATR GEAGIDGIHP SKAAPLRERE QIASAAVVGV TTVEFLDYRD GVIEYGLPLR RNIAAAIRRH RPELVITLNH RDTFHGGFWN TPDHKAVGRA TLDAATDAGN RWIFPELVDQ GLEPWNGVRW VAVAASPQPT HAVDATPGYE RAVRSLLEHR AYIEGLTDED PETYVRSFLD ETLSANAPRF GGRLAVTFEL FPR
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