Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0081 |
Symbol | |
ID | 3579715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 101996 |
End bp | 102811 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637683762 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_288142 |
Protein GI | 72160485 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.243269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCGC ATGACACTCG TCCCGACACG GCCGCACCCC CCACCTCCGC TGCGGCCGGG ACCTCTGTTG ACGTGGACCT CACCGGCCGG ACCGCTCTCG TAACCGGCGC TGCCAGCGGC ATCGGCCGCG CCTGCGCGAC CCGCCTAGCC GCCGCCGGGG CCACCGTCCG CCTCGTCGAC CTCAACCGGG AAGCCCTCGA CGAACTCGCC CAGCGCGGAA TAGGCGAACC CCACCACGTA GACCTCACCG ACCTGGACGC GGTCGACACT GTGGCACGCG GCGTCGACAT CGTCGTCAAC AACGCTGGAG TGCAGACAGT CTGCCCCGTC CACGAATTCC CCCCGGAACG CTTCTCCATG ATGGTGAAAC TCATGCTGGA AGCCCCGTTC CGGATCGTGC GGGCCGCGCT GCCGCACATG TACGCGCGCA ACTGGGGGCG GATCATCAAC ATCTCCTCCG TGCACGGGCT GCGGGCCTCC GCCTACAAGT CCGCCTACGT GGCCGCCAAA CACGGTTTGG AAGGCTTCTC CAAAGTCGTC GCCCTCGAAG GCGCCCCGCA CGGAGTCACC TCCAACTGCA TCAACCCCGG CTACGTGCGC ACCCCCCTCG TGGAACAGCA GATCGCCGAC CAGGCGCGCG CCCACGGGAT CCCCGCCAGC GACGTAGTGG AAACCGTGCT GCTGGCCCGC AGCCCCATCA AACGGCTCAT CGAACCCGCC GAAGTCGCTG AAATGGTGGC CTACCTGTGC TGTCCCGAGG CGTCTTTCAT CAACGGCGCC TCCCTGACCA TTGATGGAGC ATGGAGCGCG AGCTGA
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Protein sequence | MTPHDTRPDT AAPPTSAAAG TSVDVDLTGR TALVTGAASG IGRACATRLA AAGATVRLVD LNREALDELA QRGIGEPHHV DLTDLDAVDT VARGVDIVVN NAGVQTVCPV HEFPPERFSM MVKLMLEAPF RIVRAALPHM YARNWGRIIN ISSVHGLRAS AYKSAYVAAK HGLEGFSKVV ALEGAPHGVT SNCINPGYVR TPLVEQQIAD QARAHGIPAS DVVETVLLAR SPIKRLIEPA EVAEMVAYLC CPEASFINGA SLTIDGAWSA S
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