Gene Tfu_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0081 
Symbol 
ID3579715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp101996 
End bp102811 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content67% 
IMG OID637683762 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_288142 
Protein GI72160485 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.243269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCGC ATGACACTCG TCCCGACACG GCCGCACCCC CCACCTCCGC TGCGGCCGGG 
ACCTCTGTTG ACGTGGACCT CACCGGCCGG ACCGCTCTCG TAACCGGCGC TGCCAGCGGC
ATCGGCCGCG CCTGCGCGAC CCGCCTAGCC GCCGCCGGGG CCACCGTCCG CCTCGTCGAC
CTCAACCGGG AAGCCCTCGA CGAACTCGCC CAGCGCGGAA TAGGCGAACC CCACCACGTA
GACCTCACCG ACCTGGACGC GGTCGACACT GTGGCACGCG GCGTCGACAT CGTCGTCAAC
AACGCTGGAG TGCAGACAGT CTGCCCCGTC CACGAATTCC CCCCGGAACG CTTCTCCATG
ATGGTGAAAC TCATGCTGGA AGCCCCGTTC CGGATCGTGC GGGCCGCGCT GCCGCACATG
TACGCGCGCA ACTGGGGGCG GATCATCAAC ATCTCCTCCG TGCACGGGCT GCGGGCCTCC
GCCTACAAGT CCGCCTACGT GGCCGCCAAA CACGGTTTGG AAGGCTTCTC CAAAGTCGTC
GCCCTCGAAG GCGCCCCGCA CGGAGTCACC TCCAACTGCA TCAACCCCGG CTACGTGCGC
ACCCCCCTCG TGGAACAGCA GATCGCCGAC CAGGCGCGCG CCCACGGGAT CCCCGCCAGC
GACGTAGTGG AAACCGTGCT GCTGGCCCGC AGCCCCATCA AACGGCTCAT CGAACCCGCC
GAAGTCGCTG AAATGGTGGC CTACCTGTGC TGTCCCGAGG CGTCTTTCAT CAACGGCGCC
TCCCTGACCA TTGATGGAGC ATGGAGCGCG AGCTGA
 
Protein sequence
MTPHDTRPDT AAPPTSAAAG TSVDVDLTGR TALVTGAASG IGRACATRLA AAGATVRLVD 
LNREALDELA QRGIGEPHHV DLTDLDAVDT VARGVDIVVN NAGVQTVCPV HEFPPERFSM
MVKLMLEAPF RIVRAALPHM YARNWGRIIN ISSVHGLRAS AYKSAYVAAK HGLEGFSKVV
ALEGAPHGVT SNCINPGYVR TPLVEQQIAD QARAHGIPAS DVVETVLLAR SPIKRLIEPA
EVAEMVAYLC CPEASFINGA SLTIDGAWSA S