| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0078 |
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| Symbol | |
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| ID | 3579712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 97989 |
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| End bp | 99113 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637683759 |
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| Product | branched-chain amino acid ABC transporter permease protein |
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| Protein accession | YP_288139 |
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| Protein GI | 72160482 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.17119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTCG ACACCGACAC CAAGCACACA ACCGAGGCCC CTGCCGCCCC CGCCGCACCG
GTCGCCGAGG CGGTGCGCCG CCCCCGGCGG GTTCCCGCGT GGGTGGCCCC GGCCGTGGTC
GCGGTGGTGC TGCTGTCCCT GCCGTTTTCC ACGCTGCGGA TTCCCGGCCT GTTCGAAGGC
ACTTTGAACA GCCCGTCCAC GCTGCACGTG CTCGCCACCT GCCTTGTCCT GGGCGGGCTC
GCCACCAGCT ACGACCTGCT GTACGGGCGG GTGGGGCTGC TGTCGTTCGG GCACGCCCTC
TACTTTGCGG CCGGCGCCTA CCTGGCGGTG CTGCTCATGG GGATTCTGGA GCTGCCGCTG
CTGTGGTCGG CGCTGATCGC CGTGGCTTCC GGCACCCTGC TGGCCTTGGT GTTGGGCGCG
ATCTCGCTGC GTGTCTCCGG CATCGCCCTG GCCATGGTGA CCTTGGCGTT CGCGCAGGCC
GGGTCGATCC TGGTGGTCCG CGACCCGGGG CGGATGACCG GGGGCGAGGA AGGGCTGTCG
CTCAACCCGG ACCTGGTGCC GGACGCGTTC ATCGGCGTGG TCAACACGGT CAACCTGTAC
TGGCTGGCTG TCGGCTACGT GGTGGTGGCG CTGGGCGTGG TGTGGTGGCT GAGCGCCACC
CCGGTGGGCC GGGTCTGGCA GGGGATTCGC GCCAACGAGC AGCGGGTCTC GGTGCTGGGC
GTCAACCCTT ACCCGTACAA GCTGGCCGCG TTCACGGTCG CGGGCGCGCT CGCCTCCCTG
GGCGGGGTGG TCTACCTGGT CGTGTCCGGC GGGGTCACTC CGGCGATCAC CACCGCCGAG
TTCACGCTGA CCCTGCTGGT GATGGTGTCG CTGGGCGGCG CGGGCACCCG CTGGGGGCCC
CTGGTGGGCG CGGTCGTCTA CACCTACGTC GACCACCGGC TGCTGCAGTT GGCGGCCTCG
GACGTGTTCG ACGGTCTGCC CGCGGTGGTG CGCGCCCCGC TGAGCCAGCC GCTGTTCATC
CTCGGCACGC TTTTCGTGCT GCTGGTGTTC TTCTTCCCCG GCGGGCTTGC CGCACTGCCT
TCCCGGATCC ATGCGGCGCT GCGCCGCCGC GCCGCCGCGG CATAG
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| Protein sequence | MNVDTDTKHT TEAPAAPAAP VAEAVRRPRR VPAWVAPAVV AVVLLSLPFS TLRIPGLFEG
TLNSPSTLHV LATCLVLGGL ATSYDLLYGR VGLLSFGHAL YFAAGAYLAV LLMGILELPL
LWSALIAVAS GTLLALVLGA ISLRVSGIAL AMVTLAFAQA GSILVVRDPG RMTGGEEGLS
LNPDLVPDAF IGVVNTVNLY WLAVGYVVVA LGVVWWLSAT PVGRVWQGIR ANEQRVSVLG
VNPYPYKLAA FTVAGALASL GGVVYLVVSG GVTPAITTAE FTLTLLVMVS LGGAGTRWGP
LVGAVVYTYV DHRLLQLAAS DVFDGLPAVV RAPLSQPLFI LGTLFVLLVF FFPGGLAALP
SRIHAALRRR AAAA
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