| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0068 |
|---|
| Symbol | |
|---|
| ID | 3579065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 86404 |
|---|
| End bp | 87579 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637683749 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_288129 |
|---|
| Protein GI | 72160472 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.544206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCA CACGCTTGAT GCCGTCCCAA GAAACCGCAG ACCTGGTCGA ACTCGTCCGC
GAAGTAGCGT CGCGGGAACT CGCACCACAC GTCGCCGAAG CCGAAGAAAC CGAACGCTTC
CCCCGAGAAG CGTTCCGCAC ACTCGGCAAA CTCGGTGTCC TCGGCCTCCC CTACCCGGAG
GAGTACGGCG GAGGCGGCCA ACCCTACGAG GCCTATCTCA ACATCCTCGA AGAAATCGGA
GCAGTCTGGG CCTCCGTCGG CGTCGGCGTC AGCGTGCACG TACTCTCCTG CTACGCCCTC
GCCGTCTACG GCACCGAAGC ACAACGGCAA CGGTGGCTTC CCGACCTCCT CAGCGGCGAC
CTGCTCGGCG CCTACTGCCT CTCCGAACCG CACGCCGGCT CCGACCCCGC CGCCATGACC
ACCCGTGCCC GACGCGACGG CGACCACTAC ATCCTCGACG GCGTGAAAGC GTGGATCACC
CACGGCGGGC AAGCCGACTT CTACACGGTC ATGGCCCGCA CCAGCGACGA CCGTTCCCGC
GGCATCTCCT GCTTCCTCGT CCCCGCCGAC ACCCCGGGCC TGAGCGCCGA CCGCCCCGAA
CGGAAAATGG GGCTGACCGC CTCGCACACC ACCATGCTGC GCTTCGACGG GGTGCGCATC
CCCGCCGACC AGCGCATCGG CGCCGAAGGC CAAGGCCTGT CGATCGCGCT GTCCTCCCTC
GACGCCGGAC GGCTCGGCAT CGCCGCCGTT GCCACCGGCC TAGCCCAAGC CGCGCTCGAC
ACCGCCGTCG ACTACGCCCG GCAGCGCGAA GCCTTCGGCA AACCCATCAT CGAACATCAA
GGGCTTGCCT TCCTGCTCGC CGACATGGCC GCAGCCGTAG AAACCGCCCG CGCCGCCACC
CTGCGCGCCG CCCGCCTCAA AGACTCCGGC CTGCCCTACA GCAAAGAAGC GTCCATCGCC
AAACTCATCG CCACCGACAA CGCGATGCGC GTCACCACCG ACGCAGTCCA AGTCCTCGGC
GGCTACGGCT ACACGCGCGA CTTCCCCGTC GAACGCTACA TGCGCGAAGC CAAAGTCATG
CAGATCTTCG AAGGCACCAA CCAGATCCAG CGGCTCGTCA TCGGCCGCCA CCTCGCCCGC
GACGCTACGG CACACACGGT CACGGTCGTC CGCTAA
|
|---|
| Protein sequence | MSVTRLMPSQ ETADLVELVR EVASRELAPH VAEAEETERF PREAFRTLGK LGVLGLPYPE
EYGGGGQPYE AYLNILEEIG AVWASVGVGV SVHVLSCYAL AVYGTEAQRQ RWLPDLLSGD
LLGAYCLSEP HAGSDPAAMT TRARRDGDHY ILDGVKAWIT HGGQADFYTV MARTSDDRSR
GISCFLVPAD TPGLSADRPE RKMGLTASHT TMLRFDGVRI PADQRIGAEG QGLSIALSSL
DAGRLGIAAV ATGLAQAALD TAVDYARQRE AFGKPIIEHQ GLAFLLADMA AAVETARAAT
LRAARLKDSG LPYSKEASIA KLIATDNAMR VTTDAVQVLG GYGYTRDFPV ERYMREAKVM
QIFEGTNQIQ RLVIGRHLAR DATAHTVTVV R
|
|---|
| |