| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0061 |
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| Symbol | |
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| ID | 3579058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 71944 |
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| End bp | 74154 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637683742 |
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| Product | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal |
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| Protein accession | YP_288122 |
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| Protein GI | 72160465 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCGCC CCTCGCCTCC TTCCGGCTCT AACCCGACCG CCCCGGACGC GTTCTCGCTC
CTGCACCGGG ACGTACAACG CTGGGTATGG GAGCAGCGCT GGACCAGCCT GCGCCCCATC
CAAGAACAAG CCATCCAGCC GATCATCAGC GGTAACGTCG ACGTGCTGCT CGCAGCGGCA
ACCGCCGGCG GGAAAACCGA AGCGGTGTTC CTCCCCGTGT GCTCGGTGCT GGCCCGCGAC
GCCGACCACG GGGAGGCCAC CGGCATCCAG GCGGTGTGCC TGAGCCCGCT CAAAGCGCTC
ATCAACGACC AGCACGCGCG TCTCACCGCA CTGTGCGCGC GCATCAAAGT CCCGGTCACC
GCCTGGCACG GCGATATCGG CGTCACCCAG AAAGACCGAC TGCGGGGAGA CCCCGCCGGC
ATCCTGCTGA TCACCCCAGA GTCACTGGAA GCAATGTTCG TCAGACGCGG CTCCACGGTG
TCGCAGCTCT TCCGCGACCT GCGCTACATC GTCGTCGACG AACTGCACTC CTTCCTCGGC
ACAGCACGCG GCGCGCAACT GCGTTCCCTC ATGAACCGGC TCGAACACGC GGCAGGCCGC
CGAGTCTCCC GGATCGGCAT GTCCGCCACC CTCGCCGACC TGCGCGCCGC CGCCGAATTC
CTCCGCCCCG GCCACGGAGA ACAGGTCGTG GTCGTGGAAG ACCAGCATGG CGGCAAAGAA
CTCCTCCTCC AACTCCGCGG CTATGTGGCG GACATGCGAA GCGACCCCGG CACCAGCATG
AGCCCGGACG CGCTCGCCCA CCTGTACCAG GTGGTCCGCA CCGGGCACAA CATGGTGTTC
GTCAACTCGC GCGGGGCAGT AGAAAGCTGT GTCTCCGCCC TATCCGCGCT CGCCCGCCAA
GAGCGGCTGC CCAACCCGTT CTTCCCCCAC CACGGCTCAC TCTCCGCAGA ACTGCGCGCC
CACGCCGAAC AACGACTGAA AAACCGGTCG GCACCCGCCA CCGTGGTGTG CACGTCCACC
CTCGAACTCG GCATCGACGT GGGCTGGGTG GACACAGTCG TGCAGCTTGG GGTGCCTCCC
AGCGTGGCCG GGCTACGGCA GCGGCTCGGC CGGTCCGGGC GGGGCGGTGC CGCCGCGAAA
CTGTACTTGT ACATCACCGA ACAAGCCCAC CCCGACATGC CAGTGGACCG GCTCCGCCTT
GACCTGGTGC AGACCGTGGC CATGGTGGAA CTCCTGTTGA GCCGCTGGTA TGAGCCGCCC
AACCTGGACA CCCCGCACTT GTCCACCCTG GTCCAGCAGA TCCTGTCCGT CCTCGCCCAA
CACGGCGGCG CGCACGCCCT CCGCCTGTAC CGGGAGCTGT GCGCTACAGG CGCATTCCCG
GGAGTAGACG AGCACACTTT TGCGAGCCTG CTGCGGTCCC TCGGCGAACA CCAGCTCATC
TCCCAAGAAC GCAGCGGCCT GCTGCTGCCC GGAAAAATCG GGGAAGCCCT ACTCAACCAC
TACGCGTTCT ATTCGGCGTT CGACGTCGCC GAAGAGTACG CGATCGCCAC CGTGGACGGC
GACATGGGCA CCATGCCGCT CAGCCCCAGC GTGGACGCGG GCGCACTCCT CGCATTCGCG
GGACGCACCT GGCAGGTCGT AGAGGTGAAA CCCGATGAGC GCCGCATCCT CGTCACCCCC
GCCCGCGGCT CCGCCGTCCC ACCCGGGTTC ATGGGCTCGG CCGCCCCGGT CCACGACCGG
ATCCGGCAGC GCATGCGCGA GGTGTACCTC GACACTGAAG TGCCCCGCTA CCTCGACGAA
GCCGCAGCGA TCCTCCTTGA CGAAGGACGT TCCGCGTTCC GTGCCATGGG ACTCGCGGAC
ACCGACGTCT ACGAATACAA CGGGGACACG CTGCTGTTCC CGTGGCGGGG AGACAGAACC
GCGGAAACCC TCCGCCACCT GTTCCAGTGG GCCGGAATGA AAGCCGTCCA CGTGGGAGCG
TTCCTCGCCG TGCCAGGCAC ACCCGCGGAC TCAGTACGTG CCACAGCCGC CCACCTCGTG
GCAGCCGACC TGCCCGACCC CGTGGAACTC GCGCGCAGGG TCGCTGATCA ACGCCGCCAC
AAATACGACC GCTACCTAGG CGAGGAACTG CTGTCCCGCT CCTATGCCGC GCACGCCCTC
GACCTGGACG GAGCCCTTGA ATTCCTGAGC CGGGTCGCCG CGGACCACTG A
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| Protein sequence | MTRPSPPSGS NPTAPDAFSL LHRDVQRWVW EQRWTSLRPI QEQAIQPIIS GNVDVLLAAA
TAGGKTEAVF LPVCSVLARD ADHGEATGIQ AVCLSPLKAL INDQHARLTA LCARIKVPVT
AWHGDIGVTQ KDRLRGDPAG ILLITPESLE AMFVRRGSTV SQLFRDLRYI VVDELHSFLG
TARGAQLRSL MNRLEHAAGR RVSRIGMSAT LADLRAAAEF LRPGHGEQVV VVEDQHGGKE
LLLQLRGYVA DMRSDPGTSM SPDALAHLYQ VVRTGHNMVF VNSRGAVESC VSALSALARQ
ERLPNPFFPH HGSLSAELRA HAEQRLKNRS APATVVCTST LELGIDVGWV DTVVQLGVPP
SVAGLRQRLG RSGRGGAAAK LYLYITEQAH PDMPVDRLRL DLVQTVAMVE LLLSRWYEPP
NLDTPHLSTL VQQILSVLAQ HGGAHALRLY RELCATGAFP GVDEHTFASL LRSLGEHQLI
SQERSGLLLP GKIGEALLNH YAFYSAFDVA EEYAIATVDG DMGTMPLSPS VDAGALLAFA
GRTWQVVEVK PDERRILVTP ARGSAVPPGF MGSAAPVHDR IRQRMREVYL DTEVPRYLDE
AAAILLDEGR SAFRAMGLAD TDVYEYNGDT LLFPWRGDRT AETLRHLFQW AGMKAVHVGA
FLAVPGTPAD SVRATAAHLV AADLPDPVEL ARRVADQRRH KYDRYLGEEL LSRSYAAHAL
DLDGALEFLS RVAADH
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