| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0050 |
|---|
| Symbol | |
|---|
| ID | 3579045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 53663 |
|---|
| End bp | 55018 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637683730 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_288111 |
|---|
| Protein GI | 72160454 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1106] Predicted ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTGC GTTTCAGAGT GGCCAACCAC CGGTCGATCC GCGAGGAGCA GGAACTGTCT
CTCGTCGCGG TCCCCAAACG GGGGGAGGCG AAGCCGAAGG CTCACGAGAT CCCGCCCACG
GTCCACGTTG CAGGGATCTA CGGGGCCAAC GCCTCGGGAA AATCTAATGT GCTGGATGCC
TTGCGGTGGA TGAGCGCAGC GGTCAAGTAC TCGCACATCC ACTGGCAGCC TGATGCCGGG
GTGCCAAGGA AGCCGTTCCG GTTGGACGAC ACCTCTCACG AAGAGCCTTC GTTCTACGAG
ATCGACTTCG TTTTTGAGGG TGTACGGCAC TCCTATGGGT TCGAAGTCAC CGACCGCGAA
GTCGTGGGAG AGTGGCTTTT CGTGTTCCCG CACGGGCGCC CCAAGCGGCT TTTCGAGCGG
GAAGGACCAC AGGACTACAA GTTCGGCAAA TCCCTCAAAG GGGAATTGCG CCGTATTGAG
AAACTTACCC GCCCTAATTC CCTCTACCTG TCGTGCGCGG CGTCGAACAA CCACCCCTAT
CTTTCTTCCA TCCACCACTG GATCGGGACT CACATCCGTT TCGCTACGCA GAATTCCTTC
GATGAAGGCG TCAGGTTCCG CTTCACCCAG TCTCTGATCG AGGACCCCGG GAGCAAAGGG
GCAGAGTACG TCAGCCGGCT CGTACGAGTC GCTGACCTGG GCATCACAGA CATCGTCCTT
TCCAAAAGAG AAATCGACGG CTTCGAGAAA GAATTCATCT CTTTCATCAG GGAGAGACTC
CCCGATATCC CTGAAGAAGA ATTCCGCAAG CGAATAGAGC AGCGCCCGCT GTTCATCCAC
GATTACTCGG GAAAACCTCG ACCGCTTCCT ATCGACGAGG AGAGCGATGG GACGCGTTCG
TGGTTTGGTC TCGTGGGATT TGTGCTGCGC GTGCTTGAGG AAGGGGACGT CTTCCTCGTC
GACGAGATCG ACTCCAGCCT GCACCCGGTC CTCTCGTCCA CTCTCATCCG GATGTTCAAA
GATCCGGTCA TCAACCCCAA GGGTGCACAA ATGGTGTTTG CCTCACATGA CACCACTCTT
CTCGGTACCA TGCTGGAAAA CAAACTTCTC GAACGGGACG AAGTATGGTT CACCGAGAAG
GATGCCCACG GGGCGACCTC CCTCTACTCC CTCGTCGAAT TCCATCCGCG GGGCGACGAG
AATCCGGAAC GGGGCTACCT TCAAGGCAGA TACGGCGCTG TGCCCCACGT GAATTTCCAA
GAGATCCGGT CGCTCTTCGC CGAACTTCAC GGGGCCGCCG GTGAACCGTC CGCGTCGGCT
GAAACGGGAC CTCCGCCGGA AAGTCAATAC GCGTAA
|
|---|
| Protein sequence | MLLRFRVANH RSIREEQELS LVAVPKRGEA KPKAHEIPPT VHVAGIYGAN ASGKSNVLDA
LRWMSAAVKY SHIHWQPDAG VPRKPFRLDD TSHEEPSFYE IDFVFEGVRH SYGFEVTDRE
VVGEWLFVFP HGRPKRLFER EGPQDYKFGK SLKGELRRIE KLTRPNSLYL SCAASNNHPY
LSSIHHWIGT HIRFATQNSF DEGVRFRFTQ SLIEDPGSKG AEYVSRLVRV ADLGITDIVL
SKREIDGFEK EFISFIRERL PDIPEEEFRK RIEQRPLFIH DYSGKPRPLP IDEESDGTRS
WFGLVGFVLR VLEEGDVFLV DEIDSSLHPV LSSTLIRMFK DPVINPKGAQ MVFASHDTTL
LGTMLENKLL ERDEVWFTEK DAHGATSLYS LVEFHPRGDE NPERGYLQGR YGAVPHVNFQ
EIRSLFAELH GAAGEPSASA ETGPPPESQY A
|
|---|
| |