| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0046 |
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| Symbol | |
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| ID | 3579041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 47324 |
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| End bp | 49162 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637683726 |
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| Product | hypothetical protein |
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| Protein accession | YP_288107 |
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| Protein GI | 72160450 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAA CCACAATCCC GCCCATCAGC GAGTACGCGA TGCTGTCCGA CTGCCGCACC
GCCGCACTCG TCGCCCCCGA CAGCACCATT GAATGGCTGT GCGCGCCCCG TTTCGACAGC
CCCAGCGTCT TCGCCCGCCT CCTCGACCGG CACCACGGCG GCGCCTGGGA GTGGACCGTG
CCCGAAGCCA CCACAGTCCA CCGGGACTAC CTCGCGGAAA CCCTGGTGCT GCGCACCCGC
TGGCACACCC CGAACGGAAC CGCGGTAGGC CACGACTTCC TCGCCGTGGT CCCCCGCCAC
GCCTCCGGAA TCGCACCCGC CGGAATCCTC GTGCGGCTCC TGCACTGCGA GCGCGGCACC
GTGCGCCTCC AATCCCGGAT CACGGCACGC CCCGACTACA GCACCCGCGA CGCCCACTGG
ACCAGCCGAA GCCACGCGCT CATCGACGAG CACAGCGGCC TCCTCCTCTC CGGCCCCGCA
GAAACCATCC CCGACCGGTC AGGAGCCGTC GTCACCGACA TGGTGCTGCG CGCCGGAGAA
TCCGTGGCAC TCGGCCTCGA CTACACGGGC GACATGCTGC GCCGCGTCGA CGCCACCACC
GCCCACCACC TCCTCACCCA GACCACGCAC ACCTGGCAGG CGTGGGCATC CCGCTCCGAC
TACCAGGGCG TCGCAGCCGA CTGGGTGCGG CACAGCGCAG TCGTCCTCAA AGGACTCATA
AGCGACGACA GCGGCGCCCT CATCACCGCC CCCACCACGT CGCTCTCCGA ATGGCCGGGA
GGAGCCCGCA ACTGGGACTA CCGCTACGCG TGGCGCCGCG ACACAGCCCG GACCATCCGC
GCCCTGCTCC GCCTCGGCCA CCACAACGAC GCAGGCCAAC TGCTGCGATT CCTCCTCGAC
TACTGCGCAG AAAAAGAAAA CCGGGTGCCG CCCGTCACCC GCATCGACAA CACCCCGCTC
CCCAACGAAA CCACGCTGAC CCACCTCAGC GGCTACCACG ACTCCCGGCC CGTGCGCATC
CACAGCGACG CCTACCGGCA GCACCAGCTC GACGTCTACG GACACATCCT GGAAGCAGCC
TTCGCCTACC ACGAGGCCAC CGGACACACC TCCCTAACCG ACCTCAACGA ACTCCGCAAA
GTAGTGGAGA TCGCAGGCCG GCTGTGGCGC CACCCCGATG CCGGAGTGTG GGGGATCAAC
ACCAGTCCCC GGCACTGGAC CGAATCGAAA CTGTACGCGT GGGTGTGCTT CGACCGGGCC
ATCCGCCTCT TCCAACAGAC CGGCACCGTC CCCGCTGACA CCCTCGACCA GTGGCAGGCA
GAACGCGACG CGATCCGCAC CGACGTGATC GCGAAAGGCT GCCACGCCGG GCTCGGCAGG
TTCGTGCAAA CCTACGGGGC CGCCAACGTC GACGGCTCCC TGCTGCACAT TCCCCTCGTC
GACTTCCTCC CCGGCACCGA CCCCCGCGTC GTCGCCACCA TCGACCGGAT CGACGCCGAA
CTAGGCGAAG CCGGCTTCCT CGTGCACCGC TACGACGCCT CCACCACCCG CGACGACGTG
CCCGACACCG GGGAAGGCGC GTTCCTCCCC TGCTCGTTCG ACATGGTTTC CGCGCTCGTC
CTCGCCAACC GGGTCGACGA AGCCCACCAC CGCTTCACCA CCCTGTGCGC CCACGCCGGA
GCACTCCGCC TGTTTGCGGA AGAAATGACC GCAGACGGCA CCATGCTCGG CAACTATCCG
CACGCGTTCA CCCACCTGGC GCTGATCGAA GCAGCACTCC ACTTGGACGA AGCCCAACGG
GAACGCGCCC ACCGCGTGGA GGCCCGCCGC CCCGCCTAG
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| Protein sequence | MTTTTIPPIS EYAMLSDCRT AALVAPDSTI EWLCAPRFDS PSVFARLLDR HHGGAWEWTV
PEATTVHRDY LAETLVLRTR WHTPNGTAVG HDFLAVVPRH ASGIAPAGIL VRLLHCERGT
VRLQSRITAR PDYSTRDAHW TSRSHALIDE HSGLLLSGPA ETIPDRSGAV VTDMVLRAGE
SVALGLDYTG DMLRRVDATT AHHLLTQTTH TWQAWASRSD YQGVAADWVR HSAVVLKGLI
SDDSGALITA PTTSLSEWPG GARNWDYRYA WRRDTARTIR ALLRLGHHND AGQLLRFLLD
YCAEKENRVP PVTRIDNTPL PNETTLTHLS GYHDSRPVRI HSDAYRQHQL DVYGHILEAA
FAYHEATGHT SLTDLNELRK VVEIAGRLWR HPDAGVWGIN TSPRHWTESK LYAWVCFDRA
IRLFQQTGTV PADTLDQWQA ERDAIRTDVI AKGCHAGLGR FVQTYGAANV DGSLLHIPLV
DFLPGTDPRV VATIDRIDAE LGEAGFLVHR YDASTTRDDV PDTGEGAFLP CSFDMVSALV
LANRVDEAHH RFTTLCAHAG ALRLFAEEMT ADGTMLGNYP HAFTHLALIE AALHLDEAQR
ERAHRVEARR PA
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