| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0044 |
|---|
| Symbol | recR |
|---|
| ID | 3579039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 45983 |
|---|
| End bp | 46582 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637683724 |
|---|
| Product | recombination protein RecR |
|---|
| Protein accession | YP_288105 |
|---|
| Protein GI | 72160448 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00615] recombination protein RecR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.118922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAAG GCGCGGTTCA GAATCTGATC GACGAGCTTG GGCGGCTGCC TGGCGTCGGT
CCGAAAAGCG CGCAGCGTAT TGCCTTCCAC CTGCTCGCCG CGGAGACCGC TGACGTTCAC
CGTCTGGTCA ACGCGCTTGT CGCGGTCAAG GAGCGGGTCC GGTTCTGTGC CGTGTGCGGC
AACATTGCCG AGGAGACCCA GTGCCGGATC TGCCGTGACC CGCGTCGGGA CGACACGGTG
ATCTGTGTCG TTGAAGAGCC GAAGGATGTC GTGGCTATCG AGCGGACGCG GGAGTTCCGC
GGCCGCTACC ACGTGCTCGG TGGTGCAATC AGCCCGATCG AGGGCGTGGG CCCCGACGAT
CTGCGTGTGA AAGAGCTGAT GGCGCGCCTC TCCGAAGGCC GGGTCACCGA GGTGATTCTC
GCCACGGACC CGAACCTGGA GGGTGAGGCG ACCGCCACCT ATCTGGCACG CCTTCTGAAA
CCCATGGGGC TGAAGGTCAC CCGGCTCGCC AGTGGCCTGC CCGTGGGAGG CGACCTCGAG
TATGCGGACG AGGTCACCCT GGGCCGGGCC TTCGAAGGCC GCCGAGCCCT CGACTTCTGA
|
|---|
| Protein sequence | MYEGAVQNLI DELGRLPGVG PKSAQRIAFH LLAAETADVH RLVNALVAVK ERVRFCAVCG
NIAEETQCRI CRDPRRDDTV ICVVEEPKDV VAIERTREFR GRYHVLGGAI SPIEGVGPDD
LRVKELMARL SEGRVTEVIL ATDPNLEGEA TATYLARLLK PMGLKVTRLA SGLPVGGDLE
YADEVTLGRA FEGRRALDF
|
|---|
| |