Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0008 |
Symbol | |
ID | 3579769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 11738 |
End bp | 12430 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637683688 |
Product | hypothetical protein |
Protein accession | YP_288071 |
Protein GI | 72160414 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.327365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGACA ACGCGCAACG AGAGTCCGCT GCGGTGGAGC CGAATCCTGC CAATACCGAC AAGAGCGGAG TAGACGCCGC AAGGACTACC GAGGTCGAGG GACCCGAGAC CGAGACGCTC GGGACGGCCA CGGACTCTGA TGAAGTGACT GGGGCAGGGG GTCCCGAGAC GACCGGAGGC GCTGAGGGGG AGTCTCCGGA GAGCGCGGAC GCGGCCGAGG CATCGACCTC GGAAGCTGCA CAGGGGGGTT CGGATATGGC AGCAGAAGCG GTTGCCGCGT CACCGAGTGC CGAAAGCAAG ACCGCCAAGA CCGCGGCGCG TAAGGCGCAT CTGACGCTGA GCCGGATCGA ACCGTGGTCG GTGATGAAGT TCAGCTTCAT CATCTCGCTG GTGTGCTTCA TCATCCTGTT CGTGGCGGTC GCAGTGCTCT ACACCGGGCT GGAAGTCCTG GGTGTGTTCG ACGCGGTGAC GGAGCTGATC ACCTCGCTGA CCGAGGGGGA CGAGGTCAGT GAGGAGTTCA TCATCAACCC GGAGGTCTGG TTCTCGCCGA CCCGGATTCT TGGATACACC GCGCTGTTCG GTGCGCTGAA CGTCATCCTC ATCACGGCTC TCGCTACCGC AGGTGCGATG CTTTACAACC TGTCCGCTGA CCTCGTGGGC GGCATCGACG TAACGCTCAG CGAAACCGAG TGA
|
Protein sequence | MSDNAQRESA AVEPNPANTD KSGVDAARTT EVEGPETETL GTATDSDEVT GAGGPETTGG AEGESPESAD AAEASTSEAA QGGSDMAAEA VAASPSAESK TAKTAARKAH LTLSRIEPWS VMKFSFIISL VCFIILFVAV AVLYTGLEVL GVFDAVTELI TSLTEGDEVS EEFIINPEVW FSPTRILGYT ALFGALNVIL ITALATAGAM LYNLSADLVG GIDVTLSETE
|
| |