| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0004 |
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| Symbol | recF |
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| ID | 3579765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 4988 |
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| End bp | 6121 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637683684 |
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| Product | recombination protein F |
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| Protein accession | YP_288067 |
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| Protein GI | 72160410 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0533102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGTCT CCCACCTTCA GTTGGCCGAC TACCGGTCCT ACGAGGCCGC GTACCTGGAG
CTGGAGCCGG GAGTCAGCAC CTTCATAGGC CCGAACGGGC AGGGCAAGAC CAACCTGGTC
GAAGCGATCG GCTACGTCGC CACCCATAGC AGCCACCGCG TGGCCCACGA CGCTCCCCTC
GTCCGCCGAG GAGCCCAACG AGCCGTCATC CGCGCGGCCG TGGTCCGCCA CGGCCAAACT
GCCCTCATCG AGCTGGAGAT CAACCCTGGG CGGGCCAACC GCGCCCGCCT GAACCGCTCC
CCCAACACCC GGATGCGCGA CGTCCTCGGC ATCCTCCACA CCGTCCTGTT CGCCCCCGAA
GACCTGGCCC TGGTCAAAGG AGACCCGGGG GAGCGCCGCC GCTTCCTCGA CGAGCTGCTG
ACCGCCCGCG CCCCCCGGTA CGCGGGGGTG CGCTCCGACT ACGAACGCGT CCTCAAACAG
CGCAACGCGC TCCTCAAATC CGCAGCCGCC CAAAACCTCC ACCACCGGGG CGGCCGCGAC
CTGCCCACGC TGGACGTGTG GGACGAGCAC CTCGCCCAGA TCGGCGCGGA ACTCCTCGCG
GCACGGCTCG CCCTGGTTGC GGAACTCCAG CCCTTGGCCG CGAAAGCCTA CGGCGAACTC
ACCGCCACCC AAGACCCGAT CAGCCTGCGC TACCGCTGCT CGGCCACTGA CGAGGAGCTC
GACACCACCA ACCGTCCACA GCTTGTGGAA ATCCTGCGCG CTGCACTGCT GCGCGCCCGC
CCCGACGAAC TGCGGCGCGG TGTCAGCCTC GTCGGCCCCC ACCGCGACGA CCTGCAGCTG
TGGCTCAACG ACCTGCCAGC CAAGGGCTAT GCCAGCCAAG GCGAATCCTG GTCGTACGCC
CTCGCGCTGC GGCTCGCCGG CTTCGAACTG CTCCGCGCCG ACGGCGACGA CCCCGTCCTC
CTCCTCGACG ACGTTTTCGC GGAACTCGAC GCTGAGCGGC GGCGCCGCCT CGCCTCTTAC
GTCCGCACCG CGGAACAAGT CCTCGTCACC GCTGCCGTAC CCGACGATGT CCCCCAAGAA
CTCTCCGGGG CACGATTCCG GGTCACAGGA GGGAGCGTGG AACGTGAACG GTGA
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| Protein sequence | MHVSHLQLAD YRSYEAAYLE LEPGVSTFIG PNGQGKTNLV EAIGYVATHS SHRVAHDAPL
VRRGAQRAVI RAAVVRHGQT ALIELEINPG RANRARLNRS PNTRMRDVLG ILHTVLFAPE
DLALVKGDPG ERRRFLDELL TARAPRYAGV RSDYERVLKQ RNALLKSAAA QNLHHRGGRD
LPTLDVWDEH LAQIGAELLA ARLALVAELQ PLAAKAYGEL TATQDPISLR YRCSATDEEL
DTTNRPQLVE ILRAALLRAR PDELRRGVSL VGPHRDDLQL WLNDLPAKGY ASQGESWSYA
LALRLAGFEL LRADGDDPVL LLDDVFAELD AERRRRLASY VRTAEQVLVT AAVPDDVPQE
LSGARFRVTG GSVERER
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