Gene Tfu_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0003 
Symbol 
ID3579764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp4002 
End bp4886 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID637683683 
Product6-phosphogluconate dehydrogenase-like protein 
Protein accessionYP_288066 
Protein GI72160409 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00130229 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTCG GCATGATCGG CCTCGGCAAG ATGGGCGGCA ACATGGCCGC ACGGCTGCGC 
GACAAGGGGC ACGAGGTCAT CGGCTACGAC GTCAACCCCG AGCTGCGCGA CGTGGACTCC
ATCGCCGAAC TCGTGGAACG ACTGTCCGCC CCGCGGACCG TGTGGCTGAT GGTGCCGGCC
GGGGAGCCCA CCCGGAACAC GATCCGGGAG CTCGCCGACC TCCTCGACGA GGGCGACCTC
GTCATCGAAG GCGGCAACTC CCACTACCGG GACGACCGCG TGCACGCCGA CGAACTCGCC
CGCCGCGGCA TCGAATACCT TGATGCGGGA GTCAGCGGCG GAATCTGGGG ACGCGAAAAC
GGCTACGGCA TCATGGTCGG CGGCAGCGCC GAGAACGTGG CCCGCGCCAA GCCGATCTTC
GACGCCCTCA CCCCCGAGGC CGGGAGCGGG TTCGTCCACG CCGGGGAAAT CGGTGCCGGG
CACTTCGTCA AGATGGTCCA CAACGGCATC GAATACGGCA TGATGCAGGC CTTCGCCGAA
GGCTACGAGC TCATGGCCGC CTCTGGGATC GTCAAAGACG TCCCCGGCAC GCTCGCCAGT
TGGCGCCAAG GCACCGTGGT GCGCTCCTGG CTGCTGGACC TGCTGGTCCG CGCCCTGGAA
GAAGACCCCG AGCTGGAGCA GTTGCGCGGA TACGCTGAAG ACTCCGGTGA AGGACGCTGG
ACCGTGCAAG CCGCCGTTGA CCACGCGGTG CCCGCCCCAG TTATCACCGC CGCCCTGTAC
GCCCGGTTCG CCTCCCGGCA GGAGGACAGC CCGGCGATGA AAGTCATCGC CGCACTCCGC
AACCAGTTCG GCGGGCACGC GGTCGTCAAG AAGAACACCG ACTAG
 
Protein sequence
MQLGMIGLGK MGGNMAARLR DKGHEVIGYD VNPELRDVDS IAELVERLSA PRTVWLMVPA 
GEPTRNTIRE LADLLDEGDL VIEGGNSHYR DDRVHADELA RRGIEYLDAG VSGGIWGREN
GYGIMVGGSA ENVARAKPIF DALTPEAGSG FVHAGEIGAG HFVKMVHNGI EYGMMQAFAE
GYELMAASGI VKDVPGTLAS WRQGTVVRSW LLDLLVRALE EDPELEQLRG YAEDSGEGRW
TVQAAVDHAV PAPVITAALY ARFASRQEDS PAMKVIAALR NQFGGHAVVK KNTD