Gene GBAA_pXO1_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGBAA_pXO1_0011 
Symbol 
ID2820132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus anthracis str. 'Ames Ancestor' 
KingdomBacteria 
Replicon accessionNC_007322 
Strand
Start bp6678 
End bp8486 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content34% 
IMG OID637682687 
Productreverse transcriptase/endonuclease protein 
Protein accessionYP_016342 
Protein GI47566333 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACTG TCAATATGAA GTCGGCTGTT TCTCCACAGG TAACTCAATG GAACTCCATA 
CAATGGAAGG AAATTGAAAA CTATGTGAAG AAACTTCGAC AACGAATCTA TCGTGCCGAA
CAATTCGGTA ATAAACGTAA GGTGAGAAAA CTTCAACGTC TAATGTTGAG AAGTAAGGCG
AACCTGTTAT TAAGTATTAA GAGAGTAACG CAAATCAATC AAGGAAAACG TACTGCTGGA
ATTGATGGGA TTACTACTAA CACACCAGAG GATAGAGTTA AATTGTTCCA CTTATTAAAA
GGGTATAGTG TTAGAAACAT TAAGGCATTT CCAGTGAAAA GAGCTTATAT TCCTAAGAAG
AATGGAAAGA AAAGACCTTT AGGGATTCCA GTTATCAAAG ATAGGATATT TCAAAATATG
GTCAAAAATG CACTAGAACC TCAATGGGAA TGTCGCTTTG AGTCTATGTC TTATGGATTT
AGACCCAAAC GAAGTGCTCA TGACGCTATG GCAAACCTTT TCCTTAAATT AAGTAGAGGG
ACTAATAGAG CATGGATATT CGAAGGTGAT TTTCAAGGTT GTTTTGATAA CCTGAATCAT
GAGCATATTT TATCCTGTAT AGAAGGTTTT CCTTATAGTA ATGCAATTAA CCAATGGTTA
AACGCAGGAT GTATAGATAA TAAAACCTTC TACAAAACAG AAACTGGTAC TCCACAAGGG
GGAATTATTT CACCTTTATT AGCTAATATC GCTTTACATG GAATGGAAAA GGAATTAGGA
GTAAGATACC ATTTCCCAAA AAGGGATGGA GCTATGTTAT ATCCCGATTC AATTGGGATA
GTAAGATATG CAGATGACTT TGTTATAGTT TGTAATTCTA AAGAAGAAGC TGAAAGTATG
TATGCTAAAC TTCAACCTTA TCTTGATAAA AGAGGGTTAA AATTGGCAGA GGAAAAAACC
AGAGTAGTAC ACATTACTGA TGGTTTTGAT TTCTTAGGCT TTAATTTTAG ACAATATCCT
ACTAAAGAAG GGTCGCAACT CTTCATTAAA CCATCCAACC AAAGTGTCAA AAAAGCTAAA
GAAAAGATAA GCGAAATATT TAAATCTCAT AGAGGACGTT CAATTGGACA ATTAATCAGA
AAACTAAATC CAGTTATAAC AGGTATAGCA AATTACTGGT CACCTGTTGT AGCAAAAGTA
ATTTATGGCG ACATTGACAG TTATGTTCAT AAGAAGGTAA TGCACCATCT TAAATATAAA
CATCACCGAA AAGGCGCTAG ATGGATAAAT AAGAAATATT TCCATCCAGA CCATACAGGT
GTTAGCCAAG ACAAATGGTT ACTAACGGAC CCTGATAATC ACAAAAATCA ATTGATTCGT
ATGAGATGGA CACCAATTGT AAGACATGTA CTGATTAAGT ACAAGAATAG TCCAGATGAC
GCTAATCTTA AAAAATACTT CGCAAAAAGG GATGAAAAGA TATTCAATAG GTTCAATACA
AATTCCAAGA GAAAATTAGC GAAAAAAACT AAATATAAAT GCAGAGTTTG CAACAATTCA
TTAGTTGGAG AGGAACCACT TGAAAGTAAT CACATTGTTC CTAAAGTTAT AGGTGGAAAA
GATGAGTACG ATAATCTTGA ATTACTTCAT TGTAGTTGTC ATAAACAGCA TCATGCCCTT
TTAGAATGGT ACGGGAACGG AAAACAGCTA CCTAAAGTAC AAGCTTATTT AAAATCTCAA
AAGATACCTA TCAACAGCAA AAAAGCAGTT AGAACAATGT TAAATACATT TAAAAAGTTT
AAATACTAG
 
Protein sequence
MNTVNMKSAV SPQVTQWNSI QWKEIENYVK KLRQRIYRAE QFGNKRKVRK LQRLMLRSKA 
NLLLSIKRVT QINQGKRTAG IDGITTNTPE DRVKLFHLLK GYSVRNIKAF PVKRAYIPKK
NGKKRPLGIP VIKDRIFQNM VKNALEPQWE CRFESMSYGF RPKRSAHDAM ANLFLKLSRG
TNRAWIFEGD FQGCFDNLNH EHILSCIEGF PYSNAINQWL NAGCIDNKTF YKTETGTPQG
GIISPLLANI ALHGMEKELG VRYHFPKRDG AMLYPDSIGI VRYADDFVIV CNSKEEAESM
YAKLQPYLDK RGLKLAEEKT RVVHITDGFD FLGFNFRQYP TKEGSQLFIK PSNQSVKKAK
EKISEIFKSH RGRSIGQLIR KLNPVITGIA NYWSPVVAKV IYGDIDSYVH KKVMHHLKYK
HHRKGARWIN KKYFHPDHTG VSQDKWLLTD PDNHKNQLIR MRWTPIVRHV LIKYKNSPDD
ANLKKYFAKR DEKIFNRFNT NSKRKLAKKT KYKCRVCNNS LVGEEPLESN HIVPKVIGGK
DEYDNLELLH CSCHKQHHAL LEWYGNGKQL PKVQAYLKSQ KIPINSKKAV RTMLNTFKKF
KY