| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_R0039 |
|---|
| Symbol | |
|---|
| ID | 3570022 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1227775 |
|---|
| End bp | 1229304 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640708597 |
|---|
| Product | 16S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 9.88908e-17 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.953363 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AGAGTTTGAT CCTGGCTCAG ATTGAACGCT GGCGGCATGC CTTACACATG CAAGTCGAAC
GGCAGCACGG GAGCAATCCT GGTGGCGAGT GGCGAACGGG TGAGTAATAT ATCGGAACGT
ACCTTTCAGT GGGGGATAAC GTAGCGAAAG TTACGCTAAT ACCGCATATT CTGTGAGCAG
GAAAGCAGGG GATCGCAAGA CCTTGCGCTG ATTGAGCGGC CGATATCAGA TTAGCTAGTT
GGTGAGGTAA AGGCTCACCA AGGCGACGAT CTGTAGCGGG TCTGAGAGGA TGATCCGCCA
CACTGGAACT GAGACACGGT CCAGACTCCT ACGGGAGGCA GCAGTGGGGA ATTTTGGACA
ATGGGGGCAA CCCTGATCCA GCCATGCCGC GTGAGTGAAG AAGGCCTTCG GGTTGTAAAG
CTCTTTCAGC CGGGAAGAAA ACGCATGGGT TAATACCCTG TGTGGATGAC GGTACCGGAA
TAAGAAGCAC CGGCTAACTA CGTGCCAGCA GCCGCGGTAA TACGTAGGGT GCGAGCGTTA
ATCGGAATTA CTGGGCGTAA AGCGTGCGCA GGCGGTTTGT TAAGATAGGC GTGAAATCCC
CGGGCTCAAC CTGGGAACTG CGTTTATGAC TGGCAGGCTA GAGTATGGCA GAGGGGGGTG
GAATTCCACG TGTAGCAGTG AAATGCGTAG AGATGTGGAG GAACACCGAT GGCGAAGGCA
GCCCCCTGGG CCAATACTGA CGCTCATGCA CGAAAGCGTG GGTAGCAAAC AGGATTAGAT
ACCCTGGTAG TCCACGCCCT AAACGATGTC AACTAGGTGT TGGGAGGGTA AAACCTTTTA
GTACCGGAGC TAACGCGTGA AGTTGACCGC CTGGGGAGTA CGGCCGCAAG GTTAAAACTC
AAAGGAATTG ACGGGGACCC GCACAAGCGG TGGATGATGT GGATTAATTC GATGCAACGC
GAAAAACCTT ACCTACCCTT GACATGTCCG GAAGCCCTTA GAGATTTGGG TGTGCTCGAA
AGAGAGCCGG AACACAGGTG CTGCATGGCT GTCGTCAGCT CGTGTCGTGA GATGTTGGGT
TAAGTCCCGC AACGAGCGCA ACCCTTGTCG TTAATTGCCA TCATTTAGTT GGGCACTTTA
ACGAGACTGC CGGTGACAAA CCGGAGGAAG GTGGGGATGA CGTCAAGTCC TCATGGCCCT
TATGGGTAGG GCTTCACACG TCATACAATG GTCGGTACAA AGGGTTGCCA ACCCGCGAGG
GGGAGCTAAT CCCAGAAAGC CGATCGTAGT CCGGATCGTA GGCTGCAACT CGCCTGCGTG
AAGTCGGAAT CGCTAGTAAT CGTGGATCAG CATGTCACGG TGAATACGTT CCCGGGTCTT
GTACACACCG CCCGTCACAC CATGGGAGCG GGTTCCGCCA GAAGTAGGTA GCCTAACCGC
AAGGGGGGCG CTTACCACGG CGGGGTTCGT GACTGGGGTG AAGTCGTAAC AAGGTAGCCG
TAGGGGAACC TGCGGCTGGA TCACCTCCTT
|
|---|
| Protein sequence | |
|---|
| |