| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4201 |
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| Symbol | |
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| ID | 3566530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4498621 |
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| End bp | 4500264 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637682673 |
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| Product | protein translocase subunit yidC |
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| Protein accession | YP_287397 |
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| Protein GI | 71909810 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.017626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACTC GACGCCTGAT ACTGGTTTTG ATCTTCACGT TCTCCAGCTT CATGCTGTGG
GAAAACTGGC AGAAGTACAA CCAGCCGAAG CCTGCAGATG CTGTCGCTGC AGCGCCTGTC
TCTGGTGCTG CACCAACGCC GTCTGCCGCT TTGCAGGCCA AGGCTGCTCC CGGTACGCCG
CCGGTTGCCA CGCCAGTGTC TACCGCCGAG ACCTTCTCGA TCACTACCGA TCTGCTGAAG
GCAACCATTT CTGCCCAAGG CGGCGATCTG GTCAGTCTCG AATTGCTCAA TTACAAAGAG
CACGACGACA TTCAGAAGAA TTTCGACCTG TTCGATGCCA AGCATCAGTA TCTGGCGCAG
GCTGGTCTGA TCGGCGAAGG TTTGCCAACA CACCGCACAA CTTTCAAGCA TGTTGGCGGT
GCGACGAAAC TGGCTGACGG CACGGATGAA CTGAAGGTTC GTCTCGAATC GGCCGACCAG
AATGGCATCA AGGTCGCCAA GATCCTGACC TTCAAGCGTG GCTCCTATTT GATCGACATT
GCTTGGGAAG TTGCCAACGG CAGCGACAAG GCCATTGCAC CGCATGCTTA CTATCAGCTG
CAACGCGACG ATTTGGCCCC TGCCGGTGAA ACCAAGATGG TTTCGACCTT TACCGGTCCG
GCCGTATTTA CCGATGCCGA CAAGTATCAG AAGGTAACTT TCGAACATAT TGCCGACAAC
AAGGCCAAAT TCACCAAGAC TGCCGATAAC GGCTGGCTGG CCATGGTCCA GCACTATTTC
GTGTCGGCCT GGGTACCGAA GGACAAGACC CAGCGCGAGT TCTACATGCG CAAGGTTGAG
GGCAGCAACG TCTTCCAGGC CGGCGTAATC GTGCCGGTGG CGGAAATTGC CCCAGGGGCC
AAAGGCGAGG CATCGGTCAG CCTGTATGCC GGTCCGCAGA TGCAGTCGGC GCTCAAACAG
GTTGCTCCCG GTCTCGATCT GGTTGTCGAC TACGGTTGGT TGACCGTTGT TGCCGCACCG
ATCTTCTGGG CACTGGAAGC CATCCACAAG CTGGTTGGCA ACTGGGGCTG GGCGATTGTT
GTGCTGACCA TCATGATCAA GGCGGTCTTC TTCCCGCTAT CTGCTGCGTC CTACAAGTCG
ATGGCCAAGA TGAAGATGCT GACACCGCGT CTTGCCCAGC TGAAGGAACG TTTCGGCGAC
GACAAGCAGC GCCTGAACCA GGAAATGATG AAGCTGTACC AGACTGAAAA GGTCAATCCG
CTTGGCGGCT GCCTGCCGAT CCTGGTCCAG ATTCCGGTTT TCATTGCACT TTACTGGGTG
CTGCTCGGTG CTGTCGAAAT GCGCGGCGCA CCGTGGATCC TGTGGATCAA GGACTTGGCC
TCGGCCGACC CGTATTACAT CCTGCCGGTC ATCATGATGG TTTCGATGTT CGTCCAGACC
AAGCTGAACC CGACCCCGCC GGACCCGATC CAGGCCAAGG TCATGATGAT GATGCCGCTG
ATCTTCGGTT TCATGTTCTT CTGGTTCCCG GCCGGTCTGG TGCTCTACTG GGTCGTCAAT
AACGTATTGT CGATTGCCCA GCAGTGGCAG ATTACCCGCT TGATCGATGC CGGTGGCAAG
GCAGCGAACG ACGCCAAGGC CTGA
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| Protein sequence | MDTRRLILVL IFTFSSFMLW ENWQKYNQPK PADAVAAAPV SGAAPTPSAA LQAKAAPGTP
PVATPVSTAE TFSITTDLLK ATISAQGGDL VSLELLNYKE HDDIQKNFDL FDAKHQYLAQ
AGLIGEGLPT HRTTFKHVGG ATKLADGTDE LKVRLESADQ NGIKVAKILT FKRGSYLIDI
AWEVANGSDK AIAPHAYYQL QRDDLAPAGE TKMVSTFTGP AVFTDADKYQ KVTFEHIADN
KAKFTKTADN GWLAMVQHYF VSAWVPKDKT QREFYMRKVE GSNVFQAGVI VPVAEIAPGA
KGEASVSLYA GPQMQSALKQ VAPGLDLVVD YGWLTVVAAP IFWALEAIHK LVGNWGWAIV
VLTIMIKAVF FPLSAASYKS MAKMKMLTPR LAQLKERFGD DKQRLNQEMM KLYQTEKVNP
LGGCLPILVQ IPVFIALYWV LLGAVEMRGA PWILWIKDLA SADPYYILPV IMMVSMFVQT
KLNPTPPDPI QAKVMMMMPL IFGFMFFWFP AGLVLYWVVN NVLSIAQQWQ ITRLIDAGGK
AANDAKA
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