Gene Daro_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4185 
Symbol 
ID3566549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4483398 
End bp4484612 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content65% 
IMG OID637682657 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_287381 
Protein GI71909794 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.875277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCCG TATCGGACCT GACCGTGAAC CCGCTGCTTA TTTCCGCTTA CACCGTCACT 
ACCAGCCTCG GCCGGGGGCT TGAAGCCACG CGCGAAGCAC TGCGCAATGG GCGAAGCGGG
CTGGTCCCGT GTGCTTTCGA AACGGTACAG CTCGCCACCT GGATCGGCGA AGTCGCTGCG
GTCGACGACG AAAAACTGCC GGCAGCGCTG GCCGATTACG ATTGCCGCAA CAACCGGCTG
ACGCAGATGG GGCTGGAAAC GGACGGTTTC GCCGACCGCG TCCGCGAGGC CATCGCCCGT
TACGGCAAGA CCCGGGTTGG CATCTTCCTC GGTACCAGTA CGGCCGGCAT CCTGCAGACC
GAACTGGCCT ATCGCCGCCG CGACCCGGAA ACCGGCGCCT TGCCGGACGA TTTCCATTAC
CGCACGACGC ATAACTCCTT TTCGCTAGCC GAATTCACCC GCGACTATTT CGGGCTGGAA
GGCATGGCGA TGGCCATTTC AACGGCCTGT TCGTCGAGCG CCAAGGTCTT TGCCGCCGCC
GCCCGCCAAC TGGAACTCGG CACCATTGAT GCCGCCATCG TCGGCGGCGT CGATACGCTG
TGTTTGACCA CCCTGTACGG CTTTGCCTCG CTGCAACTGA CCTCGGCCCA ACCGTGCCGC
CCCTATGATG CGGCCCGCAA TGGCATTTCG GTCGGCGAGG GCGCCGCTTT CGCGCTGCTT
GAACGCTGTG ACCAACCGGC CGCCGGTTCG GTGCTGCTGC TCGGCACCGG CGAATCGAGC
GACGCTTATC ACATGTCCTC GCCGCACCCG GAAGGGCTGG GCGCCAAGAT GGCCATGGAA
GCGGCGCTGC GCTCGGCCGG GCTGAGCACG AACGACATCG ACTACATCAA CCTGCATGGC
ACCTCGACGC CAGCCAACGA TGCGGCCGAG GGCAAAGCGG TCAGCGCACT GTTCGGCGAC
CACGTGCCAT GCAGTTCGAC CAAGGGTGCC ACCGGTCACA CGCTCGGTGC GGCCGGTGCC
GTCGAGGCGA TCATCTGCGC TCTGGCGCTG ACGGACGGCT TCCTGCCCGG CAGCCCGGGT
ACCGAACATC TCGATCCGGC CATTCCGGTC GATTACCTGC TGCAATCCTG CACCGGCCAG
CCGCACCGCG CACTAAGCAA TTCCTTCGGT TTTGGCGGCA GCAATTGCAG CCTGATTCTG
GGAGTCGCGA AATGA
 
Protein sequence
MLPVSDLTVN PLLISAYTVT TSLGRGLEAT REALRNGRSG LVPCAFETVQ LATWIGEVAA 
VDDEKLPAAL ADYDCRNNRL TQMGLETDGF ADRVREAIAR YGKTRVGIFL GTSTAGILQT
ELAYRRRDPE TGALPDDFHY RTTHNSFSLA EFTRDYFGLE GMAMAISTAC SSSAKVFAAA
ARQLELGTID AAIVGGVDTL CLTTLYGFAS LQLTSAQPCR PYDAARNGIS VGEGAAFALL
ERCDQPAAGS VLLLGTGESS DAYHMSSPHP EGLGAKMAME AALRSAGLST NDIDYINLHG
TSTPANDAAE GKAVSALFGD HVPCSSTKGA TGHTLGAAGA VEAIICALAL TDGFLPGSPG
TEHLDPAIPV DYLLQSCTGQ PHRALSNSFG FGGSNCSLIL GVAK