Gene Daro_4182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4182 
Symbol 
ID3566546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4479641 
End bp4480966 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content62% 
IMG OID637682654 
Productanaerobic C4-dicarboxylate transporter 
Protein accessionYP_287378 
Protein GI71909791 
COG category[R] General function prediction only 
COG ID[COG2704] Anaerobic C4-dicarboxylate transporter 
TIGRFAM ID[TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.877677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATT TCTGGATTCA GTTTGCGCTG GTATTGACGG CGATCCTGAT CGGTATCCGT 
CGTGGCGGGG TGGCCTTGGG TCTGATTGGC GGGCTGGGCG TCGCGGTGCT GAGCTTCGGC
TTCCGGGTTG CACCATCGGA GCCGCCGATT ACGGTGATGC TGATCATTCT CGCCGTGGTG
ACCGCCTCGG CGACCTTGCA GGTGGCTGGC GGACTGGACT GGCTGGTCCA GCAGGCAGAG
CGTCTGATGC GCAAGCATCC GCAGCAGATC ACCATTCTCG CGCCGCTGTC CACGTTCTTG
CTGACGGTGT GCGTCGGCAC CGGCCACGCC GTTTATTCGC TGCTGCCGGT GATTGCCGAT
GTCGCGCTGA AGACCAAAAT CCGCCCGGAA CGGCCGATGG CGATTTCCAG CGTGGCGTCG
CAGATGGGCA TCACGGCCAG CCCGGTGGCG GCGGCCGTGA CGACCTTTCT GGCCATGACG
GCGAAGACCG ATGCGCCGGT GACGCTGGCG CAAATCCTGA TGGTGACCTT GCCGGCTGGC
CTGATCGGCG TGCTGGCCGC GGCCTTCTGG AGCATGAATC GTGGTCTCGA TCTGGACAAG
GATCCGGAAT TTCAGGAGCG CATGAAGGAC CCTGATTTCC GCGCCTCGGT CGAAATGTCG
GTGACGACGC TGGACAAGAC GCTGCCCAAA TCGGCCCGTC TGTCGGTGGT GCTGTTCTTC
ACCGGCATCC TGACCATCGT GGCGCTCGCG CTTTACCCGG CCGTCTTGCC GCTGGCCAAG
GGCAAGCCAA TCCCGATGAC GACGGTGGTT CAACTGGTCA TGCTGGCCTT TGGCGCTTTC
ATCCTGTTCG CGGCCGACGT CAAGGCGGCG GCTATTGCCA GGTCGGAAGT ATTCACTGCC
GGCATGATCG CTGTCGTGTC GATCTTCGGG ATCGCCTGGA TGAGCGACAC CTTCGTCAAG
GCCAACGAGG CCTTCCTGGT CGATAACATC AAGCACATGG TCGAGTACGC ACCATGGACT
TTTGCGCTGG CCATGTTCGC GGTGTCGGCC TTCGTCAAGA GCCAGGCGGC GACGCTGACC
ATCATGCTGC CCTTCGGCCT CGCCCTCGGC TTGAGTCCTC AGCTCCTGCT TGGCCTGATG
CCCTCCTGCT ACGCCTACTT CTTCTTTGCC TTCTACCCAA GCGATCTGGC GGCAATCAAC
ATGGACCGCA GCGGCACGAC GCGCATCGGC AAGTACCTGC TCAACCACAG CTTCATGATT
CCCGGCTGGA TCGGCGTGAT TACCTCAACC ATCGTGGCCT ACGGGCTGGC CCAGGTTTAT
TTTTGA
 
Protein sequence
MFDFWIQFAL VLTAILIGIR RGGVALGLIG GLGVAVLSFG FRVAPSEPPI TVMLIILAVV 
TASATLQVAG GLDWLVQQAE RLMRKHPQQI TILAPLSTFL LTVCVGTGHA VYSLLPVIAD
VALKTKIRPE RPMAISSVAS QMGITASPVA AAVTTFLAMT AKTDAPVTLA QILMVTLPAG
LIGVLAAAFW SMNRGLDLDK DPEFQERMKD PDFRASVEMS VTTLDKTLPK SARLSVVLFF
TGILTIVALA LYPAVLPLAK GKPIPMTTVV QLVMLAFGAF ILFAADVKAA AIARSEVFTA
GMIAVVSIFG IAWMSDTFVK ANEAFLVDNI KHMVEYAPWT FALAMFAVSA FVKSQAATLT
IMLPFGLALG LSPQLLLGLM PSCYAYFFFA FYPSDLAAIN MDRSGTTRIG KYLLNHSFMI
PGWIGVITST IVAYGLAQVY F