Gene Daro_4173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4173 
Symbol 
ID3566537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4470810 
End bp4472186 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content67% 
IMG OID637682645 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_287369 
Protein GI71909782 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCG CGCCGCTGCT CGCCCACAAA GATCCCGAGG CAGTCTTCGC CTGGCGCCCG 
GACGGCCCGG TCAGCGTTGG CGAATATCTG GCCGATGCTG CGGCGCTGGC CGGTCAACTG
CCAGCCACCG GCTACCTGCT CAACCTGTGC CACGACCGTT ACCGCTTCGC GGTTGGCTTT
GCCGCCGGCC TGCTGCGCGG CATGACCAGC CTGCAACCCT CATCGCAATC GGCCGAGACT
CTGCGCCGCC TGCAGGCCGA TTATCCGGGC CTCGTCTGCC TGTGCGACGG GGAGACTGAA
ACGCTGGATC TGCCCCGCCT CGACTTTCCC AACCTGGCCG TTCCCCGGGG GGAATTCCTG
CAGGGTGCAG ACAACCGGAA AAACGAGCCC AAAACGGAAT TTTCTGCCCC GCAGATTCCG
GCCGACCACG TTGCCGCCAT CCTGTTTACC TCCGGCTCAA CCGGCCTGCC GCAAGCCCAG
CCCAAGACCT GGGGCAAGTT GGTACAGAAC GGCCGGGCCG AGGCCATCGC GCTCGGTCTC
GAGCGCCAGC CGCACGCCAT CGTCGGCACC GTGCCGGTCC AGCACAGCTA CGGTTTTGAA
TCGACCTTCC TGCTCGCCCT GCACGGTGGC GGGGCTTTCT GGGCCGGCAA ACCCTTCTTC
CCGCAGGATA TCGCCACGGC GCTCGACGCC GTGCCGCAGC CGCGCCTGCT GGTCACCACG
CCTTTCCATT TGTCGACCCT GCTCGCTGCT GGCCTCGACC TGCCACCGGT CGACCTGCTG
CTCTCGGCCA CCGCACCACT GTCGACGACA CTGGCCGCCG AAGCCGAAGC CCGCACCGGC
GCTCCCTTGC TGGAAATCTA TGGCTCGACC GAATCCGGCC AGCTGGCCAG TCGACGCACC
ACCGACGGTC CGGTCTGGAC GCTGCTGCCT GGCGTCCGCC TGGAAACAGC GGACGACAGG
ACCATTGCCT GCGGTGACCA TGTAGAAGGA CGTGTCGCGC TTTCCGATCT GATCGAACTG
CTGCCCGAGC ACCGCTTCCT ACTGCATGGG CGCCACGCCG ACCTGATCAA CATCGCCGGC
AAACGCACCT CGCTGGCCTA TCTGAACCAC CAGCTCGGCG CCGTGCCCGG TGTCATCGAT
GGCACCTTCT TCCTGCCCGA CGAGGCAGGT CCGGATGGCA TTACCCGCCT CACGGCCTTC
GTCGTGGCCC CAGGGCTGAG CGCGCGGCAA GTCACCATCG CCCTGCGCGA ACGGATCGAC
GCCATCTTCC TGCCGCGACC GCTGGTGCTG GTCGACGAAC TGCCGCGCAA CAGCACCGGC
AAGCTGCCGC GCGGCGAACT GCAGGCGCTG TATGCCGAAA AGGTCAGCCA TGGCTGA
 
Protein sequence
MTSAPLLAHK DPEAVFAWRP DGPVSVGEYL ADAAALAGQL PATGYLLNLC HDRYRFAVGF 
AAGLLRGMTS LQPSSQSAET LRRLQADYPG LVCLCDGETE TLDLPRLDFP NLAVPRGEFL
QGADNRKNEP KTEFSAPQIP ADHVAAILFT SGSTGLPQAQ PKTWGKLVQN GRAEAIALGL
ERQPHAIVGT VPVQHSYGFE STFLLALHGG GAFWAGKPFF PQDIATALDA VPQPRLLVTT
PFHLSTLLAA GLDLPPVDLL LSATAPLSTT LAAEAEARTG APLLEIYGST ESGQLASRRT
TDGPVWTLLP GVRLETADDR TIACGDHVEG RVALSDLIEL LPEHRFLLHG RHADLINIAG
KRTSLAYLNH QLGAVPGVID GTFFLPDEAG PDGITRLTAF VVAPGLSARQ VTIALRERID
AIFLPRPLVL VDELPRNSTG KLPRGELQAL YAEKVSHG