Gene Daro_4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4172 
Symbol 
ID3566536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4470148 
End bp4470813 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content62% 
IMG OID637682644 
Producttransmembrane protein 
Protein accessionYP_287368 
Protein GI71909781 
COG category[S] Function unknown 
COG ID[COG4648] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA CCCCGGGCCA GTTGTTGCGC GGCCTGGCCG TGGTCGTCTT TCTCGTGCTG 
TGGGCCGTGC TGGCCCATTT CGGCAGCGCT GGCGAGAGCT CGGCCGATCT CTCCGTAGTG
CTTGGCGTCG CCCCCATTGT TACTGCCCTC TGTCTGATGC TCTGGCGCAC CACCCATCCT
GTCTTGATTG GCAGCGGCAT CGTGCTCATG CTCGGCGGAC TGACCTGGCT ATGGCCGACG
ATGCGTCAGA ACATCCCGCT ACTTTTCTTC ATCCAGCACC TGGGCACCAA TCTGGCGCTC
GGCACGCTGT TTGGTCGCAG CCTGCTGGGT AGCGGCGAAG CCTTGATCAC CCAACTGGCC
AAAGCCGTGC ATCACGGTGA AATTTCCGAG CACAAACGGC GTTACACGCG CAAGGCCACG
TTAGCCTGGA CGCTGTTTTT CCTCGGCAAC GCGCTGATCT CCACCATCCT CTGGTTGCTG
GCGTCGCAAT CCACCTGGTC AGTCTTCGCC AACCTGCTGT CGATGCCGTT GCTGGCGGCC
ATGTTCATCG CCGAGCACTT CTGGCGGGTA GTCGCTTTGC CGCCGGAAGA GCGGCCAAGC
ATTGCCCAAG TGGCCCGCGC CTATCGCATG CACGGCAAGC AGACACCGCC GGCCAAGCCG
TCATGA
 
Protein sequence
MTITPGQLLR GLAVVVFLVL WAVLAHFGSA GESSADLSVV LGVAPIVTAL CLMLWRTTHP 
VLIGSGIVLM LGGLTWLWPT MRQNIPLLFF IQHLGTNLAL GTLFGRSLLG SGEALITQLA
KAVHHGEISE HKRRYTRKAT LAWTLFFLGN ALISTILWLL ASQSTWSVFA NLLSMPLLAA
MFIAEHFWRV VALPPEERPS IAQVARAYRM HGKQTPPAKP S