Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_4172 |
Symbol | |
ID | 3566536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 4470148 |
End bp | 4470813 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637682644 |
Product | transmembrane protein |
Protein accession | YP_287368 |
Protein GI | 71909781 |
COG category | [S] Function unknown |
COG ID | [COG4648] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 74 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA CCCCGGGCCA GTTGTTGCGC GGCCTGGCCG TGGTCGTCTT TCTCGTGCTG TGGGCCGTGC TGGCCCATTT CGGCAGCGCT GGCGAGAGCT CGGCCGATCT CTCCGTAGTG CTTGGCGTCG CCCCCATTGT TACTGCCCTC TGTCTGATGC TCTGGCGCAC CACCCATCCT GTCTTGATTG GCAGCGGCAT CGTGCTCATG CTCGGCGGAC TGACCTGGCT ATGGCCGACG ATGCGTCAGA ACATCCCGCT ACTTTTCTTC ATCCAGCACC TGGGCACCAA TCTGGCGCTC GGCACGCTGT TTGGTCGCAG CCTGCTGGGT AGCGGCGAAG CCTTGATCAC CCAACTGGCC AAAGCCGTGC ATCACGGTGA AATTTCCGAG CACAAACGGC GTTACACGCG CAAGGCCACG TTAGCCTGGA CGCTGTTTTT CCTCGGCAAC GCGCTGATCT CCACCATCCT CTGGTTGCTG GCGTCGCAAT CCACCTGGTC AGTCTTCGCC AACCTGCTGT CGATGCCGTT GCTGGCGGCC ATGTTCATCG CCGAGCACTT CTGGCGGGTA GTCGCTTTGC CGCCGGAAGA GCGGCCAAGC ATTGCCCAAG TGGCCCGCGC CTATCGCATG CACGGCAAGC AGACACCGCC GGCCAAGCCG TCATGA
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Protein sequence | MTITPGQLLR GLAVVVFLVL WAVLAHFGSA GESSADLSVV LGVAPIVTAL CLMLWRTTHP VLIGSGIVLM LGGLTWLWPT MRQNIPLLFF IQHLGTNLAL GTLFGRSLLG SGEALITQLA KAVHHGEISE HKRRYTRKAT LAWTLFFLGN ALISTILWLL ASQSTWSVFA NLLSMPLLAA MFIAEHFWRV VALPPEERPS IAQVARAYRM HGKQTPPAKP S
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