Gene Daro_4148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4148 
Symbol 
ID3566648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4447666 
End bp4447992 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content54% 
IMG OID637682620 
ProductSSU ribosomal protein S30P / sigma 54 modulation protein 
Protein accessionYP_287344 
Protein GI71909757 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCTGC AGATTAGTGG TCACCACATC GAAGTTACCC CCGCCCTGCG CGAATACGTC 
GAAAACAAGC TGGATCCCGT GGTCCGTCAT TTCGACAAGG TAACCGGCGT TAGCGTCGTT
TTGTCCGTCG AAAAGCTGAA GCAGAAAGCG GAAGTGACTG TGCACGTGCC AGGCAAGGAC
ATGCATGCCG AAGAGTCCGG CGACGACCTG TACGCTGCCA TTGATGCGCT GTTCGACAAG
CTGGACCGCC AAGTTCAGAA ATACAAGCAA AAGGTTCAGG ATCACCATCG CGGTGACAAG
CCGGGACTGA TTGACGCTGC TGAATAA
 
Protein sequence
MNLQISGHHI EVTPALREYV ENKLDPVVRH FDKVTGVSVV LSVEKLKQKA EVTVHVPGKD 
MHAEESGDDL YAAIDALFDK LDRQVQKYKQ KVQDHHRGDK PGLIDAAE