| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4091 |
|---|
| Symbol | |
|---|
| ID | 3566855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 4387542 |
|---|
| End bp | 4388750 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637682563 |
|---|
| Product | BNR repeat-containing glycosyl hydrolase |
|---|
| Protein accession | YP_287287 |
|---|
| Protein GI | 71909700 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAGA CTTCGGCACG CGCTAGCGTC TTGCTGGCCG CACTGCTGCT CGCCGGCACG
GCGGCCGCCC ATGACCATGC CGACCACTCG GCCCACGACG CCAAGCCCAA AGCCGACTAC
GCCAAGGTCT GGCTGGAAAA ACAACAGACG GCGCCCCGCC TTGCCATTGC CGCGCAATTC
GACGCAACTG GCCAACTCTG GCTGGCCCGC GTGATCGGCC AACAGATTTT CGTCAGCCAT
TCCAGGGATG CCGGCAAGAC CTTCAGCGAT GCGGTGACGG TCAACCGCCA GCCCGAGCTG
ATCTCGGCCG ATGGCGAAGC CCGCCCGCAG ATCGCTGTTG CCGGGCAGCG GGTTTATCTC
AGCTGGACGC AGGCGTTGCC GCAACCGTTT GCCGGGCACG TCCGCTTCTC GGTGTCCGAA
GATGGCGGCC AGACGTTTAG CGAACCCGTC ACCGTCAATG ACGACAGCCG CCCGATCACG
CATCGCTTCA ACGCCATGCT GGCCGATGCC GGCGGCGTGA CGCTGGCCTG GATCGACAAG
CGGGACGGCA CCGGCAACTC GGACTATCGC GGTGCGGCCA TCTACACCGC CCGCTCGACC
GATGGTGGGC GCAGCTTCTT AACCAACCGC AAGCTGGCCG ACAACTCCTG CGAATGCTGC
CGCCTGGGCC TGGCCGCTGA CAGCGACGGC ACCCCGGTCG TTTTCTGGCG CCAGATTTTC
GGCAAGAACG TCCGCGACTT CGCGCTGGCC CGCCTCGATG AACCGCTACG CCGCGTTTCT
GAAGATGGCT GGGAAATCGA TGCCTGTCCG CACCATGGCG GCGCACTGGC TATCGACAAC
GAAGGCAGTC GCCACATCGC CTGGTTTACC GGCGCCGAAA AATCGCCCGG CCTGCACTAT
CGCCGCATCG ACGGCGAGAC GATGAGCCGT CCGTTCCACT TCGGCAACCT TGATGCCCAG
TCCGGACACC CGCAAGTGGC GGTTGTCGGG CGCAAGGTCG TACTCGTCTG GCGGGAATTC
GACGGCAAGT TCAATCACAT CCGCCTGATG ACCTCGCGCG ACCGGGGCCA GACCTGGTCG
GCCCCGACCA GTCTGGCCCG CACCGCCGGT GCCGCCGACG ATCCATTGCT GCTCACCGAC
CGTGGTATCC CCTGGCTGGT CTGGAATACC ACGGAGGATG GTTTGAAACG CTCGCGGATT
GCGCCATGA
|
|---|
| Protein sequence | MVKTSARASV LLAALLLAGT AAAHDHADHS AHDAKPKADY AKVWLEKQQT APRLAIAAQF
DATGQLWLAR VIGQQIFVSH SRDAGKTFSD AVTVNRQPEL ISADGEARPQ IAVAGQRVYL
SWTQALPQPF AGHVRFSVSE DGGQTFSEPV TVNDDSRPIT HRFNAMLADA GGVTLAWIDK
RDGTGNSDYR GAAIYTARST DGGRSFLTNR KLADNSCECC RLGLAADSDG TPVVFWRQIF
GKNVRDFALA RLDEPLRRVS EDGWEIDACP HHGGALAIDN EGSRHIAWFT GAEKSPGLHY
RRIDGETMSR PFHFGNLDAQ SGHPQVAVVG RKVVLVWREF DGKFNHIRLM TSRDRGQTWS
APTSLARTAG AADDPLLLTD RGIPWLVWNT TEDGLKRSRI AP
|
|---|
| |