| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4090 |
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| Symbol | |
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| ID | 3566854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 4385431 |
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| End bp | 4387548 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637682562 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_287286 |
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| Protein GI | 71909699 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGC GTTTTGCACT CGCGCCGTTG GCGCTGGCGG TCCTTTCGGC CTTTGCCTCT
ACCCAAGTAG TCGCAGCTGA CACCTCTCTG GCCGAAGTCA CCGTTACCGC CACGCGTGAG
GGGCAACTGG TCAGCGAAAC GCCGGCCACG GTCGGCGTCA TCAAGGAAAA AACGTTGCGC
GAGGTCAAGC CAACGCACCC GAGCGAAATC ATGGGCCAGG TCGCCGGCGT CTGGGTCAAC
GTCACCGGTG GCGAGGGCCA TCAGACGGCC ATCCGCCAGC CGCTGACCAC CAACCCCGTC
TATCTCTATC TGGAAGACGG CATCCCGACC CGTTCCACTG GCTTCTTCAA CCACAACGCC
CTGTACGAGG TGAACCTGCC GATGGCCGGC GGCATCGAGA TCAACAAGGG GCCAGGCAGT
GCGCTCTACG GCTCCGATGC CATCGGCGGT GTGGTCAATG TGCTGACCCG CAAGCCACCG
ACCAAACCGG AAATCGAAGG CTCGCTCGAA GGCGGCAGCT ACGGCTGGGC GCGGACCATG
GTTTCCGGCG GCAGCGCCTT TGGCGACCAC GCTTTCCGGG CCGACCTCAA CCTGAGCCAC
ACCGACGGCT GGCGCGACAA GACCGCGTAC GACCGGCAGA GCGGCACCCT GCGCTGGGAC
AGCGCTATCG GCGATGATGC AACCCTGAAG ACGGTCGCCA CCTTCTCCAA GATCGACCAG
CAGACAGCCG GCAGCTCGGC CATCTCGAAG AACGATTACG ACAACAACCC GAAGGCCAAC
TACACCCCGA TCTCGTTGCG CAAGGTCGAC GCCTTCCGCC TGTCGACCGC CTACGAGAAG
GAGTGGGGCA ACTCGCTGCT CAGCATCACC CCCTACTACC GCAACGATTC GATGGATCTG
CTGGCCAACT GGTCGCTGTC CTACGACCCG ACCATCTACA CCACCGAGAA CCAGTCCTTC
GGCGCCCAGA TCAAGTATCG CCACGACTTC GAGCCGCTGC GCACCCGTTT CATTGTCGGT
ATCGACCTCG ACCACAGTCC GGGCAGCCGC ATCGAAAACC GCATCAACAC GACCTCGACC
GGCAGCGGTT ACACCAAGAT CTACACCGGC TACACAACGG GCGCCCGGGT CTATGACTAC
GACGTGACCT ATCAGGGAAT CTCGCCCTAT GTGCATGGTG AGATTTCGCC GATCGAAAAG
CTGCGCATCA CTGCCGGCCT GCGCCAGGAC CATGTCTCCT ACCGTTTCGA CAACCGCTAC
GGCACCTCGC CGGTCGTCGT CGGTTCGGCC TATTACGGCC AGGTCGCCGA TGGCGACCTG
AGCTTCAACC ACCTCAGTCC CAAGCTGGGT GCCACCTACG CCTTCAGCGA TTCTCTGAAC
GCCTTCGCCG CCTACAACCA CGCCTTCCGC GCCCCGTCCG AAGGCCAGCT CTTCCGCCCT
TCCGTCGCCG CCAGCGCCGC TGCAGCAAAT GCCGCAGCAA TCGCCGCCAG CAACCTGAAA
CCTATCAAGG TCGACAGCGT CGAAACCGGC CTGCGTGGCA ACATTAACCG TTCCGTAAAC
TACGAGGTCT CGGTCTATTA CATGACCAAG ACCGACGACA TCCTGAGCTA CCGCGACCCG
GTCACCAACA TCACGACCTC GACCAATGCC GGCAAGACGC TGCACAAAGG GATCGAGATC
GGCCTCGGCA TCCAGATCGC TTCTGCCTGG CGACTCGACA CCGCCCTCTC ACACGCCAAG
CACACCTATG GCGAGTGGCG CGTTGGCACG ATCGATTACA CTGGCAAGGA AATGGAACTC
GCCCCCCGCA CCATCGCCAA TACCCGCCTG ACCTGGGGCG ATGCCAAGAC CGGCATGGTC
CAGGCCGAAT GGCTGCACTT CAGCAGTTGG TGGTCCGACC AGGCCAACAC CACGAAGTAC
GATGGTCACG ACCTGCTTAA CCTGCGCGGC GCTTATCCGC TGTACCGCGA TATCAGCCTG
TTCGGCAACG TGCATAACGT GACCGACCGT CGTTACGCGG AAAGTACCGG AACACAAACC
GCCGGTGGCG TGATTTACCC GACCTTCGCC CCTGGCCTGC CACGCACCTT TACCGTCGGG
ATCCAGGCCA AATGGTAA
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| Protein sequence | MMKRFALAPL ALAVLSAFAS TQVVAADTSL AEVTVTATRE GQLVSETPAT VGVIKEKTLR
EVKPTHPSEI MGQVAGVWVN VTGGEGHQTA IRQPLTTNPV YLYLEDGIPT RSTGFFNHNA
LYEVNLPMAG GIEINKGPGS ALYGSDAIGG VVNVLTRKPP TKPEIEGSLE GGSYGWARTM
VSGGSAFGDH AFRADLNLSH TDGWRDKTAY DRQSGTLRWD SAIGDDATLK TVATFSKIDQ
QTAGSSAISK NDYDNNPKAN YTPISLRKVD AFRLSTAYEK EWGNSLLSIT PYYRNDSMDL
LANWSLSYDP TIYTTENQSF GAQIKYRHDF EPLRTRFIVG IDLDHSPGSR IENRINTTST
GSGYTKIYTG YTTGARVYDY DVTYQGISPY VHGEISPIEK LRITAGLRQD HVSYRFDNRY
GTSPVVVGSA YYGQVADGDL SFNHLSPKLG ATYAFSDSLN AFAAYNHAFR APSEGQLFRP
SVAASAAAAN AAAIAASNLK PIKVDSVETG LRGNINRSVN YEVSVYYMTK TDDILSYRDP
VTNITTSTNA GKTLHKGIEI GLGIQIASAW RLDTALSHAK HTYGEWRVGT IDYTGKEMEL
APRTIANTRL TWGDAKTGMV QAEWLHFSSW WSDQANTTKY DGHDLLNLRG AYPLYRDISL
FGNVHNVTDR RYAESTGTQT AGGVIYPTFA PGLPRTFTVG IQAKW
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