| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4086 |
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| Symbol | |
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| ID | 3566850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 4379691 |
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| End bp | 4381586 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637682558 |
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| Product | response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal |
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| Protein accession | YP_287282 |
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| Protein GI | 71909695 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA CATCGCCGCT TCGCTCGGTG CGAGGTCGGC TGCTGATCGT CGCCATTGCC
ATCGAAGCGG TGATGCTGAC TTTGCTGGTC GCCAACAGCC TGCGCCTGCT GACCACCCAT
ATGGGCCGAC AGGCGGAGCA GCATGTCGAG GAAATCGCCC CCGTGCTGAT CGCCGCCATC
GTGGCGCCAC TGGCCCAGCG CGACTATGCC ACCGTGCAGG CGGTGTTCGA CGAAAGCACC
AAGGTTGGCG GCATCGATTA CCTGGCGCTT GCCAACAATG ACGGAAAACT GGTGGCCAGC
AGCGGCTGGC CGGAAGGCGC AGCCCTGCCG CCAGCCGACC CGCACCTCAA TATCTTTGAT
GCCGACAAGC AGAAACCGCG CTACGACGTG CTGGTTCCCG TCGTTACCTA TGGCCAGAAA
ATGGGTTCGC TGCACATCGG CATCGATCTC TCGCAAATCC GGACCGCCCA TAACCAGTTG
TTCTCCCAAG GCATTTTCAT CGCCCTGATC GAGATGCTGC TTTCGGCCGG TCTGATGATC
CTGCTCGGCT ATTTCCTGAC CCGCCATCTG GCGGGCCTGA CCCAGGCCAG CGAAGCAGTT
GCCGCCGGCA ACCTGACCCC GCCACCGGTG CCCGAAGGCA ACGACGAGGT AGGGCGCCTT
GGCGCCGCCT TCAACGCCAT GTCACGGGCG GTGGCCGAGC GCATTCTTGA ACTCACTGCC
TCACGCGACG AACAGGCCCG ACTGGCCAGA AGCGCCGAGA CGGCAGCCCG CGCCAAGACG
TCCTTTCTGG CCACGATGAG TCATGAAATA CGGACGCCGA TGAATGGCAT CCTGGGCATG
ACCGAACTGA CGCTGGCCAC CGATCTCACC GAGGAACAAC GCGAATACCT GACCTGGGTT
AAATCCTCGG GTGACAACCT GATGCGTGTT CTCAACGACA TCCTCGATTT CTCGAAGATC
AATGCCGGTG AACTCAACCT CGAACACATA CCGCTAGACC TGAGCAGCTT GCTGGACAGC
GTGGTCGCGC TCTATTCATC GGTGGCTGCC AACAAGGGCT TGCGCCTCTA CTGGGCCGCC
GACACCGAAC TTCCCGAGCA CCTTCTGGGC GACCCGGTGC GCATCCAGCA AGTGCTCAAC
AATCTGCTGT CCAATGCACT CAAATTTACC GAGCATGGCG AGGTCGCCAT TCGCGTGCAT
TGCGAGAAAA CCCTCGAAAA CAGCAAGGTG TGGCGTGTCC ACTTCACCGT CGCCGATACC
GGCATCGGCA TCCCGGCCAG CAAACTGGGC AATATCTTCG ACCCCTTCGC CCAGGCCGAA
GAATGGACAA CGCGCAAGTA TGGCGGCACC GGCCTCGGGC TCTCGATTGT CGAGCGTCTT
GTCCGGCTGA TGCATGGCGA GATTCGCGTT GAAAGTGCGG TGGGCGAAGG CACCCGCTTT
CATTTGCTGA TCCATCTCGA TCAGGCCGAA AAATCGACCC CGAAGATCGC CGAACTCGAC
AAGGAAGCGG CGCAGTGCAA ACTGACCAAC AAGCAAATCC TGCTGGTCGA AGACACGCCG
GTCAATCAGA AAATCGCCGA AAAGCTGCTT TCCCGCTATG GTTGCCGCGT GACCATTGCC
GTCAATGGTC TGGAAGCGCT GGCCGCTGTC GAACGCGACA CCTTCGATCT GATCCTGATG
GACATGCAGA TGCCCGAAAT GGATGGCGTC GAAGCAACCC GGCACCTGCG CATCCGGGAA
GCAGAACTCA AGCTGCCACG CCAGCCAATT GTCGCCATGA CCGCCAATGC CATGGAGGAA
GATCGGGAAC AATGCATCAC CGCCGGCATG GACGACTTCA TCGCGAAACC CTTCCGGGCT
GACGAAGTGA TCAGCATGCT GCTGCGTTAC CTCTAG
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| Protein sequence | MKFTSPLRSV RGRLLIVAIA IEAVMLTLLV ANSLRLLTTH MGRQAEQHVE EIAPVLIAAI
VAPLAQRDYA TVQAVFDEST KVGGIDYLAL ANNDGKLVAS SGWPEGAALP PADPHLNIFD
ADKQKPRYDV LVPVVTYGQK MGSLHIGIDL SQIRTAHNQL FSQGIFIALI EMLLSAGLMI
LLGYFLTRHL AGLTQASEAV AAGNLTPPPV PEGNDEVGRL GAAFNAMSRA VAERILELTA
SRDEQARLAR SAETAARAKT SFLATMSHEI RTPMNGILGM TELTLATDLT EEQREYLTWV
KSSGDNLMRV LNDILDFSKI NAGELNLEHI PLDLSSLLDS VVALYSSVAA NKGLRLYWAA
DTELPEHLLG DPVRIQQVLN NLLSNALKFT EHGEVAIRVH CEKTLENSKV WRVHFTVADT
GIGIPASKLG NIFDPFAQAE EWTTRKYGGT GLGLSIVERL VRLMHGEIRV ESAVGEGTRF
HLLIHLDQAE KSTPKIAELD KEAAQCKLTN KQILLVEDTP VNQKIAEKLL SRYGCRVTIA
VNGLEALAAV ERDTFDLILM DMQMPEMDGV EATRHLRIRE AELKLPRQPI VAMTANAMEE
DREQCITAGM DDFIAKPFRA DEVISMLLRY L
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