Gene Daro_4078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4078 
Symbol 
ID3566842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4373004 
End bp4373918 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID637682550 
Productbranched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase 
Protein accessionYP_287274 
Protein GI71909687 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACC GCGACGGCTT TATCTGGCTC GACGGCCAGT GGCTGCCCTG GCGCGATGCC 
AAGGTGCACG TGCTGACCCA TACCCTGCAT TACGGCTACG GCTGTTTCGA GGGCATCCGT
GCTTATGAAA CACCGCGCGG GCCGGCCATC TTCCGGCTCG CCGAGCATCT GCGCCGGCTG
GAGGATTCGG CTCACATCCT GGCCATTGAC CTGCCTTTTG ACCGCGAAAC ACTGGCCGCC
GCCTGCCGTG AGGCGGTGAC GCGCAACAAT TTCAGCAGCG CCTACATCCG GCCGCTGGTC
TTTCTCGGTG CTGAAAAACT GGGCGTCGAT CCGGCCGGTG CGGCAGCGCA CGTCATGGTC
GCCGCCTGGC CGTGGGGCGC CTACCTCGGC GGCAAGGCGA TCGAGGAGGG CATCCGCGTC
CGCGTGTCGT CCTATGCCCG GCACCATCCC AACGTGCAGA TGTGCCGCGC CAAGGCGATT
TCGACCTATT CGAACTCCAT CCTCGCCGTG CGCGAGGCGC GCCGCGACGG TTACGACGAA
GCGCTGCTTC TCGATACCGA TGGCTATGTT TCCGAAGGCT CCAGCGAAAA CCTGTTCATC
GTCCGCGATG GTGAATTGCT GCAGCCGGAC AGTGCTTCGG CGCTCGACGG CATCACCCGT
CGTACGGTCT GCACGCTGGC CGCGGAGGCC GGCCTGGTGG TGCGCAGCAA GCGCCTGACC
CGCGACGAGG TGGTTTGCGC CGATGAGGTC TTCCTGACCG GCACGGCGGC CGAGATCACG
CCCGTGATCG AAGTCGATGC CCGGCGCATC GGTACGGGTC GCCCCGGGCT GCTGACCCGG
CGTCTGCAGA AGGCCTATTT CGCCTGCGTC CGTGGCGAAG ACGCCGCCCA TGGCGATTGG
CTGACAATGG CATGA
 
Protein sequence
MQDRDGFIWL DGQWLPWRDA KVHVLTHTLH YGYGCFEGIR AYETPRGPAI FRLAEHLRRL 
EDSAHILAID LPFDRETLAA ACREAVTRNN FSSAYIRPLV FLGAEKLGVD PAGAAAHVMV
AAWPWGAYLG GKAIEEGIRV RVSSYARHHP NVQMCRAKAI STYSNSILAV REARRDGYDE
ALLLDTDGYV SEGSSENLFI VRDGELLQPD SASALDGITR RTVCTLAAEA GLVVRSKRLT
RDEVVCADEV FLTGTAAEIT PVIEVDARRI GTGRPGLLTR RLQKAYFACV RGEDAAHGDW
LTMA