Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_4078 |
Symbol | |
ID | 3566842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 4373004 |
End bp | 4373918 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637682550 |
Product | branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase |
Protein accession | YP_287274 |
Protein GI | 71909687 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
Num covering plasmid clones | 74 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACC GCGACGGCTT TATCTGGCTC GACGGCCAGT GGCTGCCCTG GCGCGATGCC AAGGTGCACG TGCTGACCCA TACCCTGCAT TACGGCTACG GCTGTTTCGA GGGCATCCGT GCTTATGAAA CACCGCGCGG GCCGGCCATC TTCCGGCTCG CCGAGCATCT GCGCCGGCTG GAGGATTCGG CTCACATCCT GGCCATTGAC CTGCCTTTTG ACCGCGAAAC ACTGGCCGCC GCCTGCCGTG AGGCGGTGAC GCGCAACAAT TTCAGCAGCG CCTACATCCG GCCGCTGGTC TTTCTCGGTG CTGAAAAACT GGGCGTCGAT CCGGCCGGTG CGGCAGCGCA CGTCATGGTC GCCGCCTGGC CGTGGGGCGC CTACCTCGGC GGCAAGGCGA TCGAGGAGGG CATCCGCGTC CGCGTGTCGT CCTATGCCCG GCACCATCCC AACGTGCAGA TGTGCCGCGC CAAGGCGATT TCGACCTATT CGAACTCCAT CCTCGCCGTG CGCGAGGCGC GCCGCGACGG TTACGACGAA GCGCTGCTTC TCGATACCGA TGGCTATGTT TCCGAAGGCT CCAGCGAAAA CCTGTTCATC GTCCGCGATG GTGAATTGCT GCAGCCGGAC AGTGCTTCGG CGCTCGACGG CATCACCCGT CGTACGGTCT GCACGCTGGC CGCGGAGGCC GGCCTGGTGG TGCGCAGCAA GCGCCTGACC CGCGACGAGG TGGTTTGCGC CGATGAGGTC TTCCTGACCG GCACGGCGGC CGAGATCACG CCCGTGATCG AAGTCGATGC CCGGCGCATC GGTACGGGTC GCCCCGGGCT GCTGACCCGG CGTCTGCAGA AGGCCTATTT CGCCTGCGTC CGTGGCGAAG ACGCCGCCCA TGGCGATTGG CTGACAATGG CATGA
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Protein sequence | MQDRDGFIWL DGQWLPWRDA KVHVLTHTLH YGYGCFEGIR AYETPRGPAI FRLAEHLRRL EDSAHILAID LPFDRETLAA ACREAVTRNN FSSAYIRPLV FLGAEKLGVD PAGAAAHVMV AAWPWGAYLG GKAIEEGIRV RVSSYARHHP NVQMCRAKAI STYSNSILAV REARRDGYDE ALLLDTDGYV SEGSSENLFI VRDGELLQPD SASALDGITR RTVCTLAAEA GLVVRSKRLT RDEVVCADEV FLTGTAAEIT PVIEVDARRI GTGRPGLLTR RLQKAYFACV RGEDAAHGDW LTMA
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