Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_4067 |
Symbol | |
ID | 3566908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4363148 |
End bp | 4363873 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637682539 |
Product | hypothetical protein |
Protein accession | YP_287263 |
Protein GI | 71909676 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 0.751245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGGTC ATTCCAAGTG GGCCAATATC CAGCACCGTA AAGGTCGCCA GGACGAGAAG CGCGGTGCCG CCTTCTCCAA GATTGCCAAG GAAATTACCG TTGCGTCCAA GATGGGCGGC GGCGACATCA ACTTCAACCC GCGCCTGCGC GTCGCGGTCG ACAAGGCCAA GGGCGTCAAT ATGCCCAAGG ACAAGATCGA TACCGCAATC AAGAAGGGTA CCGGTGAGCT GGAAGGTGTC GAGTACATCG AGATCCGCTA CGAAGGCTAT GGCATCGGCG GCGCGGCGAT CATGGTCGAC TGCCTGACCG ACAACAAGGT GCGCACGGTG GCCGAAGTTC GCCATGCCTT CTCCAAGTTT GGCGGCAACA TGGGTTCCGA TGGCTGCGTG GCGTTCCAGT TCAAGCACTG CGGCCAGATG ATCTTCGCCC CGGGTACCGA CGAAGGCGCG CTGATGGATG CGGCCATCGA AGCCGGTGCC GACGATGTGA CGACCAATGA CGACGGCTCG ATCGAGGTTT TGACCCCGCC GAACGACTAC ATGGCCGTCA AGGACGCGCT GGAAGCGGCC GGTTTCAAGC CGGAGTTCGG CGAAGTGACG ATGAAGCCGG AAGGCGAAAA CGTTTTCGCC GGCGAGGAAG GCGTGAAGAT GCAGAAGCTG CTCGACGCGC TGGAAAATCT CGACGACGTG CAGGAAATCT ACACCACGGC GGTCATCGAA GACTGA
|
Protein sequence | MAGHSKWANI QHRKGRQDEK RGAAFSKIAK EITVASKMGG GDINFNPRLR VAVDKAKGVN MPKDKIDTAI KKGTGELEGV EYIEIRYEGY GIGGAAIMVD CLTDNKVRTV AEVRHAFSKF GGNMGSDGCV AFQFKHCGQM IFAPGTDEGA LMDAAIEAGA DDVTTNDDGS IEVLTPPNDY MAVKDALEAA GFKPEFGEVT MKPEGENVFA GEEGVKMQKL LDALENLDDV QEIYTTAVIE D
|
| |