Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_4053 |
Symbol | tolB |
ID | 3567050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4351886 |
End bp | 4353199 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637682525 |
Product | translocation protein TolB |
Protein accession | YP_287249 |
Protein GI | 71909662 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGTA AAATCGCGCG AAACCTTTTG AAAATGAACG CAATGTCCCG AATTTCCCGT CGTATTTTTC TTGCCCTGGC CTTGTCTTTG GCCGGTCTGG CGCAGGCTCA GCTGTCCATC GAGATTACCG GTGCCGGTGC CAATCGGATT CCGGTGACCA TCGTCGACTT TCCTGGCGAC CCGACGGCTG CCCGCGTGGT CACCGCGACG GTGCGCGCTG ACCTGGAGCG AAGCGGCCTG TTCAAGCTGG TCGATAACGG CACCGCCGCT TTCGATGAAA ACGCCCCGGT CAATCACGCC GAGTGGAAAG GCAAAGGGGC GGACGCCCTG GCCGCCGGCA GTATCGCCCG CAGCACTGAT GGCCGCATGG AAGCCCGTTT CCGTCTGTAC GACACGCAAA AAGGCGTATC GCTGGGCGGT GCCGCTTACG TGACCAACAA TAGCCAGCTG CGCGCTGCCG GTCACCGCAT TGCCGACTTC ATCTACGAAA AACTGACCGG CGAGAAAGGG GTTTTCTCGA CCCGTATTGC CTATGTCGTC AAGGCGCGTG GCCAGTTCCT GCTGCAGATC GCCGATTCGG ACGGTCAGAA TGCCGCTACC GCCCTGAGCT CGACCGAACC GATCATTTCG CCGGTCTGGT CGCCGGATGG CGGGCGTCTG GCCTACGTCT CCTTTGAAAA GAAGAAGCCG GTCATCTACG TGCATACCCT GGCTTCCGGT CAGCGTCACA TCGTCGCCAA TTTCAAGGGT TCCAATTCAG CGCCGGCCTG GTCGCCCGAT GGCCGCAAGC TCGCCGTTGT CCTGTCCAAG GATGGCAATT CGCAGATCTA CTCGGTCAAT GCCGATGGCA GCGGCCTGCA GCGCATCACC CAGTCTTCCG GCATCGATAC CGAGCCGCGT TACTCGGCAG ACGGCGGCAC CATCTACTTC ACCTCCGACC GCGGCGGCAG CCCGCAGGTC TATCAGGTCG GCGCCAGCGG CGGTGACGCC AAGCGCGTCA CCTTTGAAGG TAGCTACAAC GTTTCGCCGC GCCCGGCGCC GGATGGCAAG AGCCTGGCCT TCATCAGCCG GCGTGAAGGT CGCTTCCAGC TCGCCGTGAT GGATTTGGCC AGTCGCCAGG TGCAGGTGGT CAGCGATTCC AACAAGGACG AATCTCCAAG CTTCGCCCCC AACAGCCGCA TGATCCTGAT CGCCACTGAA ATCGGCGGTC GCGGCGTACT ATCGGCTGTG TCCAGCGATG GCAGGATCAA ACAACGCCTC TCGGTCGCCG CAGGTGATGT ACGCGAACCG GCCTGGGGCC CTTACTATCA ATAA
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Protein sequence | MKSKIARNLL KMNAMSRISR RIFLALALSL AGLAQAQLSI EITGAGANRI PVTIVDFPGD PTAARVVTAT VRADLERSGL FKLVDNGTAA FDENAPVNHA EWKGKGADAL AAGSIARSTD GRMEARFRLY DTQKGVSLGG AAYVTNNSQL RAAGHRIADF IYEKLTGEKG VFSTRIAYVV KARGQFLLQI ADSDGQNAAT ALSSTEPIIS PVWSPDGGRL AYVSFEKKKP VIYVHTLASG QRHIVANFKG SNSAPAWSPD GRKLAVVLSK DGNSQIYSVN ADGSGLQRIT QSSGIDTEPR YSADGGTIYF TSDRGGSPQV YQVGASGGDA KRVTFEGSYN VSPRPAPDGK SLAFISRREG RFQLAVMDLA SRQVQVVSDS NKDESPSFAP NSRMILIATE IGGRGVLSAV SSDGRIKQRL SVAAGDVREP AWGPYYQ
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