| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4053 |
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| Symbol | tolB |
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| ID | 3567050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4351886 |
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| End bp | 4353199 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637682525 |
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| Product | translocation protein TolB |
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| Protein accession | YP_287249 |
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| Protein GI | 71909662 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGTA AAATCGCGCG AAACCTTTTG AAAATGAACG CAATGTCCCG AATTTCCCGT
CGTATTTTTC TTGCCCTGGC CTTGTCTTTG GCCGGTCTGG CGCAGGCTCA GCTGTCCATC
GAGATTACCG GTGCCGGTGC CAATCGGATT CCGGTGACCA TCGTCGACTT TCCTGGCGAC
CCGACGGCTG CCCGCGTGGT CACCGCGACG GTGCGCGCTG ACCTGGAGCG AAGCGGCCTG
TTCAAGCTGG TCGATAACGG CACCGCCGCT TTCGATGAAA ACGCCCCGGT CAATCACGCC
GAGTGGAAAG GCAAAGGGGC GGACGCCCTG GCCGCCGGCA GTATCGCCCG CAGCACTGAT
GGCCGCATGG AAGCCCGTTT CCGTCTGTAC GACACGCAAA AAGGCGTATC GCTGGGCGGT
GCCGCTTACG TGACCAACAA TAGCCAGCTG CGCGCTGCCG GTCACCGCAT TGCCGACTTC
ATCTACGAAA AACTGACCGG CGAGAAAGGG GTTTTCTCGA CCCGTATTGC CTATGTCGTC
AAGGCGCGTG GCCAGTTCCT GCTGCAGATC GCCGATTCGG ACGGTCAGAA TGCCGCTACC
GCCCTGAGCT CGACCGAACC GATCATTTCG CCGGTCTGGT CGCCGGATGG CGGGCGTCTG
GCCTACGTCT CCTTTGAAAA GAAGAAGCCG GTCATCTACG TGCATACCCT GGCTTCCGGT
CAGCGTCACA TCGTCGCCAA TTTCAAGGGT TCCAATTCAG CGCCGGCCTG GTCGCCCGAT
GGCCGCAAGC TCGCCGTTGT CCTGTCCAAG GATGGCAATT CGCAGATCTA CTCGGTCAAT
GCCGATGGCA GCGGCCTGCA GCGCATCACC CAGTCTTCCG GCATCGATAC CGAGCCGCGT
TACTCGGCAG ACGGCGGCAC CATCTACTTC ACCTCCGACC GCGGCGGCAG CCCGCAGGTC
TATCAGGTCG GCGCCAGCGG CGGTGACGCC AAGCGCGTCA CCTTTGAAGG TAGCTACAAC
GTTTCGCCGC GCCCGGCGCC GGATGGCAAG AGCCTGGCCT TCATCAGCCG GCGTGAAGGT
CGCTTCCAGC TCGCCGTGAT GGATTTGGCC AGTCGCCAGG TGCAGGTGGT CAGCGATTCC
AACAAGGACG AATCTCCAAG CTTCGCCCCC AACAGCCGCA TGATCCTGAT CGCCACTGAA
ATCGGCGGTC GCGGCGTACT ATCGGCTGTG TCCAGCGATG GCAGGATCAA ACAACGCCTC
TCGGTCGCCG CAGGTGATGT ACGCGAACCG GCCTGGGGCC CTTACTATCA ATAA
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| Protein sequence | MKSKIARNLL KMNAMSRISR RIFLALALSL AGLAQAQLSI EITGAGANRI PVTIVDFPGD
PTAARVVTAT VRADLERSGL FKLVDNGTAA FDENAPVNHA EWKGKGADAL AAGSIARSTD
GRMEARFRLY DTQKGVSLGG AAYVTNNSQL RAAGHRIADF IYEKLTGEKG VFSTRIAYVV
KARGQFLLQI ADSDGQNAAT ALSSTEPIIS PVWSPDGGRL AYVSFEKKKP VIYVHTLASG
QRHIVANFKG SNSAPAWSPD GRKLAVVLSK DGNSQIYSVN ADGSGLQRIT QSSGIDTEPR
YSADGGTIYF TSDRGGSPQV YQVGASGGDA KRVTFEGSYN VSPRPAPDGK SLAFISRREG
RFQLAVMDLA SRQVQVVSDS NKDESPSFAP NSRMILIATE IGGRGVLSAV SSDGRIKQRL
SVAAGDVREP AWGPYYQ
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