Gene Daro_4052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4052 
Symbol 
ID3567049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4351325 
End bp4351867 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content63% 
IMG OID637682524 
ProductOmpA/MotB 
Protein accessionYP_287248 
Protein GI71909661 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAC TGCTGATCCC CGCCCTGCTG TCGGCCCTGC TGGCTGCTTG TTCCACCACC 
CCGCTGCCGG AAGACGGCGG CGCCCCCGTC GAGTCGCGTA GCGGCTCCGG CTCGGGCGTT
GCACCGGTGA CTGCCGGTGG CCTCGATGCC AGCGGCCTGC CGCGCGAGTT GACCGATCCG
AAGAGCAAGC TGTCGCAGCG CAGCATCTAC TTCGATCTCG ACAAGTACGA AGTCAAGGAC
GAATACAAGG ATCTGGTTGC CGCTCACGCC AAGTACCTGG TCGCCAACAA GGGCTTCAAG
GTGCTGCTCC AGGGCAACAC CGACGAGCGC GGCAGCCGCG AATACAACCT GTCGCTCGGC
CAGAAGCGGG CCGAAGCCGT CAAGCGTTCG CTGACCTTGC TCGGCGTCAA GGATGACCAG
ATCGAATCAG TCAGCCTCGG CGAAGAAAAG CCGAAGGATG CCGGTCATGA CGAAGCAGCC
TGGTCGCAAA ACCGTCGTGC CGACATCCTC TACAAGGCTG CTGACGGCCG CGGCGAGTTC
TAA
 
Protein sequence
MKKLLIPALL SALLAACSTT PLPEDGGAPV ESRSGSGSGV APVTAGGLDA SGLPRELTDP 
KSKLSQRSIY FDLDKYEVKD EYKDLVAAHA KYLVANKGFK VLLQGNTDER GSREYNLSLG
QKRAEAVKRS LTLLGVKDDQ IESVSLGEEK PKDAGHDEAA WSQNRRADIL YKAADGRGEF