Gene Daro_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4047 
Symbol 
ID3567044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4346431 
End bp4347141 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID637682519 
ProductABC transporter related 
Protein accessionYP_287243 
Protein GI71909656 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCC TGCTCGAAGT TGCCGGTCTG GAAGTCGCCT ATGGCCCGAG CCAGGTGCTG 
TTCGGCCTCG ATCTGGCCAT GAACGAGGGC GAGGCGGCGA CGCTGCTTGG CCGCAACGGC
ATGGGCAAGA CGACGACACT GCGTGCCGTC TGCGGGCTGG AGCCGGTCAA GGCCGGCAGC
ATCCGCTTTG CCGGCGAGCG CATCGATGGC TGGCGGGCCG ATCGTATTGG CCGGGCAGGC
ATCGCGCTGG TCCCGGAAGG GCGGCAGTGC TTCCCGAACC TGACCGTCGA TGAGCATCTG
GTGGCCTTTT TCGCCAACCG GCGCGGCGTC GCTGAGCCAT GGACACCGGC TCGTGTCTAC
GAGCTTTTCC CCCACCTGCT CGAGCGCTCA AAAAATCTCG GCAACCAGCT TTCCGGCGGC
GAACAGCAAA TGCTGGCCAT CGGCCGGGCG CTGGTCACCA ATCCGCGTTT ATTGATCCTC
GACGAAGCCA CCGAAGGCCT CGCCCCGCTG ATCCGCGATG AAATCTGGGC TTGCCTGGCC
CGTTTGCGCA ACGAGGGACA GAGCGTGCTG GTCATCGACA AGTATGTCGA AAAACTGATC
GCCCTGGCCG ACCGCCACAC CATCATCGAG CGTGGGCAGG TCGTCTGGCG TGGCTCATCG
GCCGAGCTCG ATGCCGATCA CGGCATCTGG CACCGTTATC TGGGAATCTA G
 
Protein sequence
MTALLEVAGL EVAYGPSQVL FGLDLAMNEG EAATLLGRNG MGKTTTLRAV CGLEPVKAGS 
IRFAGERIDG WRADRIGRAG IALVPEGRQC FPNLTVDEHL VAFFANRRGV AEPWTPARVY
ELFPHLLERS KNLGNQLSGG EQQMLAIGRA LVTNPRLLIL DEATEGLAPL IRDEIWACLA
RLRNEGQSVL VIDKYVEKLI ALADRHTIIE RGQVVWRGSS AELDADHGIW HRYLGI