Gene Daro_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4024 
Symbol 
ID3567196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4323065 
End bp4323784 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content64% 
IMG OID637682497 
ProductGntR family transcriptional regulator 
Protein accessionYP_287221 
Protein GI71909634 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value0.466546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCGT TGCCAATTGC CGGATGCCCG ATCATGAACA GCCCCGCCGA AATCCCCGTC 
GTCACCCGTC AATCCGAACG CCTGGGTGAG CTGATCGAAG AGCGTATCGT GACCGGCACT
TATCCGCCGG GAACGCGGCT CGACGAACAG GAGTTGGCAA GCACCTTTGG CGTCTCGCGG
ACCCCAGTGC GCGAGGCACT GATCCAGCTG GCATCGATCG GCCTGATCGA AATCCGCCCG
CGGCGCGGCG CGACGGTGCC GGAAATCGGC GCCGACCGGG TCTGTGAAAT GTTTGAAGTG
ATGGCCGAAC TGGAAGCCAT GTGCGGCCGC CTGGCGGCCC GGCGGATTAC CGCCAGCGAG
CAGCTCGCCC TACAGGAAGC CCACCGCGCC TGTGAAGCGG CGCGCGATGC CGACACGCCG
GACATTTACT ATCAATTGAA TGAAGTGTTT CATCAGCGCA TCTACGAAGC CAGTCACAAC
GGCTTCCTGG TCGAGCAGGC CACCGCCCTG CACCGTCGCC TGCGCCCCTA TCGCCGCCTG
CAACTGCGCG TGCGCAACCG GATGGCGACC TCGTTCAACG AACATCTGGC AATTGTCGAA
GCCATCAACA AGGGGGATAG CGATCTGGCG GCAGCCCTGC TGCGTGCTCA TGTCACGGTT
CAGGGCGAGC GCTTCGCCGA CCTGGTCGCC ACCCTGCGCG ACTTCAACGC CGGCGTCTAA
 
Protein sequence
MQSLPIAGCP IMNSPAEIPV VTRQSERLGE LIEERIVTGT YPPGTRLDEQ ELASTFGVSR 
TPVREALIQL ASIGLIEIRP RRGATVPEIG ADRVCEMFEV MAELEAMCGR LAARRITASE
QLALQEAHRA CEAARDADTP DIYYQLNEVF HQRIYEASHN GFLVEQATAL HRRLRPYRRL
QLRVRNRMAT SFNEHLAIVE AINKGDSDLA AALLRAHVTV QGERFADLVA TLRDFNAGV