| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4021 |
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| Symbol | |
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| ID | 3567193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4319973 |
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| End bp | 4321325 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637682494 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_287218 |
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| Protein GI | 71909631 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0000127778 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAT CAAGCATTGG CATTCTCTAC GGCCTGGGCA CCTTGGCCGT GATGTTCTCC
GGCATTCCCA TCGCCTTCGC GCTGGGCTCC ATTGCCGTCC TTTTCATGCT GCTCTTCATG
CCGGCAGCGG CGACCGACAC CATTACCCAG AACGTCTTCG AGGAAATGGC CAACATCACG
CTGCTGTCGA TCCCGCTATT CATCCTGAAA GGCGCGGCCA TCGGCCGATC GCGCGCCGGC
GCCGACCTTT ACCTGGCGAT TCACGCCTGG ATGCACAAGA TTCCCGGTGG CCTCGGCATC
GCCAACGTCT TCGCCTGTGC GCTGTTTGCG GCGATGGCCG GCTCCAGCCC GGCGACCTGT
TCGGCGATTG GTGGCGCTGG CATTCCGGAA ATGCGGGCGC GCGGCTATTC ACCCGGGTTC
GCCGCCGGCA TCATCGCCGC CGGTGGCACG TTGGGGATTC TGCTGCCGCC GTCGATCACG
ATGATCCTGT TCGCGGTCGC CGCCGAGCAG TCGCTGGGCC GCCTCTTCCT CGCCGGCATC
TTCCCCGGCC TGCTGCTGGT CTTCCTGTTC GCCGGCTATG CCGTGTTCCG CTTCAAGGTC
GAATACAACT CGGCACTCGA TGTCTGGCAT TCCGGTGGCG CCAAGTCGGC CTACCTCGAC
GAAATGCGCA TGACCCGGGC CGACAAGACC CGCATGCTGC CGCGCGTGAT TCCCTTCGTG
CTGCTGCTGA TCGGCGTCAT GTTGGCGCTT TATGGCGGCT ACGCGACGCC GTCGGAAACC
GCCGGTCTTG GCGGCATCCT GGCGCTTGCC CTGATCGCCG GCATCTACGG CGTCTGGCGT
CCTTCGCAAC TGAAACCGAT CCTCAACAGC ACGTTGAAGG AGTCGACCAT GTTGATGTTC
ATCATCGGCA TGTCGCTGCT CTACTCCTAC GTGATGAGCT ATCTGCACAT CAGCCAGTCG
GCGGCCGAGT GGATCGTGGC CATGCATCTG TCGAAATGGC TGCTGCTCGC TGCCATCCTG
ATTTTTGTGG TGATTCTCGG CTTCTTCCTG CCGCCGGTGT CGATCATCCT GATGACCGCG
CCGATCATCC TGCCGCCGCT CAAGGCCGCT GGCTTCGACC TAATCTGGTT TGGCATCGTG
ATGACCGTGG TCATGGAAAT GGGCCTGATT CATCCGCCAG TCGGCCTCAA TATCTTCGTG
ATCAAGAACG TCGCGCCGGA CATTCCGCTC AAGGACATCG TCTGGGGTGT CTTCCCCTTC
GTCGGTCTGA TGTTCCTCGC CGTGATCCTG CTTTGCATCT TCCCGGGCAT TGCCACCTGG
TTGCCGGATG TGGTCATGGG CGTGGCGAGC TAA
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| Protein sequence | MAESSIGILY GLGTLAVMFS GIPIAFALGS IAVLFMLLFM PAAATDTITQ NVFEEMANIT
LLSIPLFILK GAAIGRSRAG ADLYLAIHAW MHKIPGGLGI ANVFACALFA AMAGSSPATC
SAIGGAGIPE MRARGYSPGF AAGIIAAGGT LGILLPPSIT MILFAVAAEQ SLGRLFLAGI
FPGLLLVFLF AGYAVFRFKV EYNSALDVWH SGGAKSAYLD EMRMTRADKT RMLPRVIPFV
LLLIGVMLAL YGGYATPSET AGLGGILALA LIAGIYGVWR PSQLKPILNS TLKESTMLMF
IIGMSLLYSY VMSYLHISQS AAEWIVAMHL SKWLLLAAIL IFVVILGFFL PPVSIILMTA
PIILPPLKAA GFDLIWFGIV MTVVMEMGLI HPPVGLNIFV IKNVAPDIPL KDIVWGVFPF
VGLMFLAVIL LCIFPGIATW LPDVVMGVAS
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