| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4020 |
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| Symbol | |
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| ID | 3567192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4318295 |
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| End bp | 4319959 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637682493 |
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| Product | alpha subunit of malonate decarboxylase |
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| Protein accession | YP_287217 |
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| Protein GI | 71909630 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.0677734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAC CGCAACCCCG TCAATGGGAC AGCCTGCGCC AGAACCGGGC GCGCCGCCTG
GAACGGGCGG CCAGCCTCGG CCTGGCTGGC CAGAATGGCA AGGAAATTCC GGTCGATCGC
ATCATCGACC TGCTCGAAGC CGTCATCCAG CCGGGCGACC GTGTCTGCCT CGAGGGCAAC
AACCAGAAGC AGGCCGATTT CCTGTCCGAG TCGCTGGCCG ATTGCGATCC GGCCCGTATC
AATCACCTCA GCATGGTCCA GTCTGTCCTG GCGCTTCCGA GCCACGTGGA CCTTTTCGAG
CGCGGCCTGG CAACCCGCCT CGACTTTTCT TTCAGCGGCC CGCAGGGCGC CCGGCTGGCC
AAGCTGGTCC AGGAACAGCG CATCGAGATC GGGGCCATCC ATACCTATCT CGAACTGTTC
GGGCGCTATT TCATGGATCT GACGCCGAAT GTGGCGCTGA TCGCGGCGCA GGCGGCCGAT
GCCGAGGGCA ACCTCTACCT CGGGCCGAAT ACCGAGGACA CGCCGGCCAT CGTCGAGGCG
ACCGCGTTCA AGGGCGGCAT CGTGATCGCC CAGGTCAACG AGCGCCTCGA CAAGCTGCCG
CGCGTCGATG TGCCGGCCGA CTGGGTCGAC TTCACGGTGC TGGCGCCGAA GCCCAACTAC
ATTGAGCCAC TATTCACCCG CGACCCGGCG CAGATCACCG AAGTCCAGGT GCTGATGGCG
ATGATGGCGA TCAAGGGCAT CTACGCCGAA TACGGCGTTA CCCGGCTCAA TCACGGCATC
GGCTTCGATA CCGCGGCGAT CGAGTTGCTG CTGCCGACCT ACGCTGCCGA CCTCGGCCTG
AAGGGCAAGA TCTGCACGCA CTGGGCGCTC AATCCACATC CGACGCTGAT TCCGGCCATC
GAAGCCGGTT TCGTCGAGTC GGTCCATTGT TTCGGTTCCG AAGTCGGCAT GGATGACTAC
ATCTCCGCCC GTTCCGACAT CTTTTTTACC GGTGCCGACG GCAGCATGCG TTCCAACCGG
GCGTTTTCGC AAACGGCCGG CCTTTACGCC TGCGATATGT TCATCGGCTC GACCTTGCAG
ATGGACTTGG CCGGCAACAG TTCGACCGCG ACGCTGGGCC GCATCACCGG CTTCGGCGGG
GCGCCGAACA TGGGGTCCGA TCCGCACGGC CGGCGTCATG CCAGCCCGGC CTGGCTCAAG
GCCGGGCGTG AGGCCTACGG GCCGCAGGCG ATTCGCGGCC GCAAGCTGGT GGTGCAGATG
GTCGAGACTT TCCGCGAACA CATGGCGCCG GTTTTCGTCG ACGATCTCGA TGCCTGGAAG
TTGCAGGCCA GCATGGGTTC CGACCTGCCG CCGATCATGA TCTACGGCGA CGACGTCAGC
CATATCGTTA CCGAGGAAGG CATCGCCAAC CTGCTGCTCT GCCGCACACC GGCTGAGCGC
GAGCAGGCGA TCCGCGGTGT GGCCGGCTTC ACGCCGGTCG GGATGGCGCG GGACAAGGGC
ACCGTCGAAA ACCTGCGCGA TCGCGGCATC ATCCGCCGCC CGGAAGACCT CGGCATCGAC
CCGCGCCAGG CCAGCCGCGA CCTGTTGGCC GCCCGTTCGA TCAAGGATCT GGTGCGCTGC
TCCGGTGGCC TGTACGCGCC GCCTTCACGT TTCCGCAACT GGTGA
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| Protein sequence | MNAPQPRQWD SLRQNRARRL ERAASLGLAG QNGKEIPVDR IIDLLEAVIQ PGDRVCLEGN
NQKQADFLSE SLADCDPARI NHLSMVQSVL ALPSHVDLFE RGLATRLDFS FSGPQGARLA
KLVQEQRIEI GAIHTYLELF GRYFMDLTPN VALIAAQAAD AEGNLYLGPN TEDTPAIVEA
TAFKGGIVIA QVNERLDKLP RVDVPADWVD FTVLAPKPNY IEPLFTRDPA QITEVQVLMA
MMAIKGIYAE YGVTRLNHGI GFDTAAIELL LPTYAADLGL KGKICTHWAL NPHPTLIPAI
EAGFVESVHC FGSEVGMDDY ISARSDIFFT GADGSMRSNR AFSQTAGLYA CDMFIGSTLQ
MDLAGNSSTA TLGRITGFGG APNMGSDPHG RRHASPAWLK AGREAYGPQA IRGRKLVVQM
VETFREHMAP VFVDDLDAWK LQASMGSDLP PIMIYGDDVS HIVTEEGIAN LLLCRTPAER
EQAIRGVAGF TPVGMARDKG TVENLRDRGI IRRPEDLGID PRQASRDLLA ARSIKDLVRC
SGGLYAPPSR FRNW
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