Gene Daro_4017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4017 
Symbol 
ID3567189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4316357 
End bp4317079 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID637682490 
Productmalonate decarboxylase gamma subunit 
Protein accessionYP_287214 
Protein GI71909627 
COG category 
COG ID 
TIGRFAM ID[TIGR03134] malonate decarboxylase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCA ACGATATTCT CGATCGCCTG TTCCCGGCCG GCCATACGAT CGCCGTAGCC 
AACCAGGTGA TCACCGGCCA GGCGCAGACA GCGCAAGGCA TGGTGGCCGT GCTCGGCACC
ACCGATGCGG CGGCCATCGA TCATGCGATG GCGCTGGCAC TGGCCGATTT TGTCCTCGAC
ACCGTCGAGC AGCATCCCGG CCGGCCGCTG GTTTTCCTGG TCGATACCTG CGGTCAGGCC
CTGTCGCGCA GTCAGGAGCT GCTCTGCCTG AACGGCTCGC TGGCCCATCT CGCCAGTTGC
GTCGATCTGG CGCGCCGCCA GGGCCATCCT TCGCTCAGCC TGGTCACCGC CAACGCGGTC
AGCGGCGGCT TCCTGTCCTT CGGCCTGATG GCCGACCAGG CCTACGCGTT GGCCGACGCC
CAGGTCCGGG TCATGGACCT GCGGGCCATG GCGCGGGTGA CCAAGATCGC CCATGAGCGC
CTGGTCGAAC TGGCCACCAC TTCCCCGATC TTCGCGCCGG GCGCCGAGAG CTATGTCCGC
ATGGGCGGCA TCGCGGCGAT CTGGCCGGGG CCGTCGGCCG ACCTGCTGGC GAGTGCGCTG
GCCGATGCGG CCACGGCGTG TGCCGCGGGT GACCGGCGCC AGGCCGAGGG TCTGGCCCGC
GGCGGGCGTC AACTGGCGGC CGGGATTGCT CAAACCGTCC GCAATTCGGC GCCCGGGGTC
TGA
 
Protein sequence
MSLNDILDRL FPAGHTIAVA NQVITGQAQT AQGMVAVLGT TDAAAIDHAM ALALADFVLD 
TVEQHPGRPL VFLVDTCGQA LSRSQELLCL NGSLAHLASC VDLARRQGHP SLSLVTANAV
SGGFLSFGLM ADQAYALADA QVRVMDLRAM ARVTKIAHER LVELATTSPI FAPGAESYVR
MGGIAAIWPG PSADLLASAL ADAATACAAG DRRQAEGLAR GGRQLAAGIA QTVRNSAPGV