Gene Daro_4000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4000 
Symbol 
ID3567211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4298221 
End bp4298700 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content64% 
IMG OID637682473 
Productperiplasmic nitrate reductase maturation protein NapF 
Protein accessionYP_287197 
Protein GI71909610 
COG category 
COG ID 
TIGRFAM ID[TIGR00402] ferredoxin-type protein NapF 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.692634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGACC TGTCACGGCG CAGCTTTTTC CGGGGGCGAC CTCGCCCCAG GACAGAGCTC 
CGTCCGCCGT GGGCTCTGCA GGAAGACGCC TTCATCGACC ACTGCACACG CTGCAGTGAC
TGCGTGAAAG CCTGTCCGAC CCAGATCATC GCGATCGGGG ACGGCGGCTA TCCAACCGTC
GATTTCAGCC TTGGGGAATG CACTTTCTGC GGCGATTGCG TCAGTCGTTG CCAACCCAAG
GCCCTGGTTC GCCTTGAACC TGAACAAGTC GCCTGGGCCT ACAAAGCCAC TATCGGCGAA
GACTGCCTGC CCCGACAAGG GGTCGAATGC CGGGTCTGTG GCGATTTTTG CGACACCCGC
GCCATCCGTT TCCCGCCGCG CCTGGGCGGT AGCCCACTGC CGGAAATTGA TGCGGAAACG
TGCACCGGCT GCGGCGCCTG CGTTGCGCCT TGTCCGGTCA CCGCCATCGG CGTTGGCTAG
 
Protein sequence
MVDLSRRSFF RGRPRPRTEL RPPWALQEDA FIDHCTRCSD CVKACPTQII AIGDGGYPTV 
DFSLGECTFC GDCVSRCQPK ALVRLEPEQV AWAYKATIGE DCLPRQGVEC RVCGDFCDTR
AIRFPPRLGG SPLPEIDAET CTGCGACVAP CPVTAIGVG