Gene Daro_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3998 
Symbol 
ID3567209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4296885 
End bp4297373 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content61% 
IMG OID637682471 
Productcytochrome C biogenesis protein 
Protein accessionYP_287195 
Protein GI71909608 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value0.678852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.946907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC GCTTCCTGAT TGCACTTTTC ATTTTTGGCT CTTTTTTTGG GTCGACCGCA 
GCCTTGGCCG ATGCGGCCAC CGAAGCGGCC ACCGCCGCCG ACCCGGTGGC CGAAAAGCGC
CTGCAAAAGC TCTCCGAGGA ACTGCGCTGC CTGGTCTGCC AGAACCAGAC CATTGCCGAC
TCCAATGCTG AACTGGCGCA GGATCTGCGC CGCGAAGTCC GCACCATGAT CAAGGATGGC
AAGACCGACA AGGAAATCGT CGATTTCATG GTCGTCCGCT ATGGCGATTT CGTGCTCTAC
CGGCCGCCAG TCAAGGGCAT CACCCTGCTG CTCTGGGGCG GCCCCATCGT CTTGATGTTG
CTTGGCCTGT TCATGCTGCA GCGCTATCTG CGCCGCCGCT CGACCCGCAT TGATGCCGAA
GATCAGCCGC TGTCGGCTGA CGACGCCAGC CGCGCCGACG CGCTGCTCAA GGAAAACGAC
CAGAAATGA
 
Protein sequence
MKRRFLIALF IFGSFFGSTA ALADAATEAA TAADPVAEKR LQKLSEELRC LVCQNQTIAD 
SNAELAQDLR REVRTMIKDG KTDKEIVDFM VVRYGDFVLY RPPVKGITLL LWGGPIVLML
LGLFMLQRYL RRRSTRIDAE DQPLSADDAS RADALLKEND QK