| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3993 |
|---|
| Symbol | |
|---|
| ID | 3567282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 4292909 |
|---|
| End bp | 4293655 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637682466 |
|---|
| Product | cytochrome c-type biogenesis protein CcmC |
|---|
| Protein accession | YP_287190 |
|---|
| Protein GI | 71909603 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATC GCTTCAATCT CTATCGTTTC GCATCGCCCG CCACGTTTTA CCCGCTGGCC
GGTGCGCTGA TTCCTTTCTT TGTCGCCATT TCAGTGCTCT TTGGCCTGGC CGGACTCTAC
CTCGGCATGC TGGTTGCCCC GACCGACTTT CAGCAGGGCG AGGGTTACCG GATCATCTTC
ATCCACGTCC CGGCTTCCTG GATGTCGATG TTCATCTACC TGGTCATGGC CTTCTGGGCG
GCTATCGGAC TGGCCTTCAA CACCCGGCTT TCCGGCATGA TGGCCCAGGC GCTGGCGCCG
ACCGGTGCGC TGATGGCCTT CATCTCGCTG TGGACCGGCG CCCTGTGGGG CAAGCCGATG
TGGGGTGCGT GGTGGGTGTG GGATGCGCGC CTGACTTCAG AGCTGATTCT GCTCTTCCTG
TACATCGGTT ACATGGCCTT GACCGCCGCG ATCGACGACG CGCGCCGCGC CGACAAGGCC
GGTGGCCTGT TGTTGCTGGT CGGCGTAGTC AATGTGCCGA TCATCTATTT CTCGGTCAAA
TGGTGGAACA CCCTGCACCA GGGCTCCAGC GTCAACCTGG CCAAGTCGTC GATGGCGCAG
ACCATGCTCT GGGGCATGCT GCTGATGGCC ATGTGTTTCT GGATGTATTC CATCGCCGTC
GCCCTGATGC GGGTGCGCAC CATCATGCTT GAACGCGAGC GCAATACCGA CTGGGTCAAG
GCCGTACTGG AAGGAGAAGG CAAGTGA
|
|---|
| Protein sequence | MKDRFNLYRF ASPATFYPLA GALIPFFVAI SVLFGLAGLY LGMLVAPTDF QQGEGYRIIF
IHVPASWMSM FIYLVMAFWA AIGLAFNTRL SGMMAQALAP TGALMAFISL WTGALWGKPM
WGAWWVWDAR LTSELILLFL YIGYMALTAA IDDARRADKA GGLLLLVGVV NVPIIYFSVK
WWNTLHQGSS VNLAKSSMAQ TMLWGMLLMA MCFWMYSIAV ALMRVRTIML ERERNTDWVK
AVLEGEGK
|
|---|
| |