| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3988 |
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| Symbol | |
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| ID | 3567277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4283347 |
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| End bp | 4285143 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637682461 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_287185 |
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| Protein GI | 71909598 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTT ACGAAACCCA AGGCTTCAAG GTTGATAACT CCGGCAAGCG CGTCGTCGTC
GATCCGGTCT GCCGCATCGA GGGCCACCTG CGGGTGGAAG TGAATCTCGA CGACAAGAAC
GTCATCCGTA ATGCCGTGTC GACCGGCACC ATGTGGCGCG GTCTGGAAGT GATCCTCAAG
GGCCGCGATC CGCGCGACGC CTGGGCCTTT ACCGAACGCA TCTGCGGCGT CTGTACCGGC
ACCCATGCGC TGACCTCGGT GCGTGCCGTC GAGGATGCGC TGAAGATCCA GATCCCGGAG
AACGCCAACA CCATCCGCAA CCTGATGCAG CTGAACCTTT ACGTTCACGA CCATCTGGTG
CACTTCTATC ACCTGCACGC GCTGGACTGG GTCGATGTCG TGTCGGCGTT GAAGGCTGAT
CCGAAGGCGA CTTCCGCACT GGCCCAGAGC ATTTCTTCCT GGCCGCTGTC CTCGCCGGGT
TACTTCCGCG ACATCCAGAA TCGTCTGAAG AAATTTGTCG AATCCGGCCA GCTCGGCCCG
TTCATGAACG GCTACTGGGG CAACCCGGCC TACAAGCTGC CGCCGGAAGC CAACCTGATG
GCCGTGGCCC ACTACCTCGA AGCCCTCGAT TTCCAGAAGG AAATCGTTAA GGTGCACACC
ATTTTCGGCG GCAAGAATCC GCATCCGAAC TGGCTGGTTG GTGGCGTGCC CTGCGCGATC
AACCTCGAAG GCGTCGGTGC CGTCGGGGCG GTGAACATGG AGCGCCTGAA TCTGGTCAAG
AGCATCATTG ACCGCTGTGC CGAGTTCGTC GAACAGGTCT ACATCCCCGA CCTGCTGGCC
ATCGGCTCCT TCTACAAGGG CTGGCTGTAC GGTGGCGGTT TGTCGTCGAA GAACCTGCTG
TCATACGGCG ATATTCCACA GAAGGCCAAC GATTACACCT CGGGCAACCT GCTGCTGCCG
CGTGGTGCGA TCATCAATGG CAAGCTCGAT GAGATTCACC CGGTCGATCT GAAAGACCCG
GAACAGGTGC AGGAATTCGT CGCCCACTCC TGGTACAAGT ACCCGGACGA AACCAAGGGC
CTGCACCCGT TCGATGGCGT CACCGAACCC AGTTTCGTGC TCGGCCCGAA CACCAAGGGC
ACCAAGACCA ACATCAAGGA ACTCGACGAG GGCGGCAAGT ATTCGTGGAT CAAGGCGCCG
CGCTGGCGTG GTCACGCCAT GGAAGTCGGC TGCCTGCCGC GCATGGTGCT GGGCTACCTG
CAACCCAAGC AGTACCCGGA AATCCACGGT CTGGTCGACG GCGCGCTGAA GAAGCTTGAT
GTGCCGGTTA CTGCGCTGTT CTCGACGCTT GGTCGCACCG CGGCGCGTGG TCTGGAAACG
GCGTACTGCG TCAAGCTGCA GCAACAGCAG TTCGACAAGC TGATGACCAA CCTGAAGTCC
GGTGACCTGA ACACGGCTAA CATCGAGAAG TGGGAACCCA GCACCTGGCC GAAGGAAGCG
ATGGGTGCCG GTTTTACCGA AGCCCCGCGC GGTGCGCTCG GTCACTGGAT CCGCATCAAG
GACACCAAGA TCGACAACTA CCAGTGCGTC GTGCCGACCA CCTGGAACGG CGGTCCGCGT
GACCACAAGG GCCAGATCGG TGCCTTCGAG GCCTCGCTGA TGGATACCCC GGTGGCCAAG
GCCGATGAAC CGCTGGAAAT CCTGCGTACG CTGCATTCCT TCGATCCCTG CCTGGCCTGC
TCGACGCACG TGATGAGCCC GGACGGCCAG GAAATGACGT CGGTCAAGGT CCGCTAA
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| Protein sequence | MSAYETQGFK VDNSGKRVVV DPVCRIEGHL RVEVNLDDKN VIRNAVSTGT MWRGLEVILK
GRDPRDAWAF TERICGVCTG THALTSVRAV EDALKIQIPE NANTIRNLMQ LNLYVHDHLV
HFYHLHALDW VDVVSALKAD PKATSALAQS ISSWPLSSPG YFRDIQNRLK KFVESGQLGP
FMNGYWGNPA YKLPPEANLM AVAHYLEALD FQKEIVKVHT IFGGKNPHPN WLVGGVPCAI
NLEGVGAVGA VNMERLNLVK SIIDRCAEFV EQVYIPDLLA IGSFYKGWLY GGGLSSKNLL
SYGDIPQKAN DYTSGNLLLP RGAIINGKLD EIHPVDLKDP EQVQEFVAHS WYKYPDETKG
LHPFDGVTEP SFVLGPNTKG TKTNIKELDE GGKYSWIKAP RWRGHAMEVG CLPRMVLGYL
QPKQYPEIHG LVDGALKKLD VPVTALFSTL GRTAARGLET AYCVKLQQQQ FDKLMTNLKS
GDLNTANIEK WEPSTWPKEA MGAGFTEAPR GALGHWIRIK DTKIDNYQCV VPTTWNGGPR
DHKGQIGAFE ASLMDTPVAK ADEPLEILRT LHSFDPCLAC STHVMSPDGQ EMTSVKVR
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