Gene Daro_3981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3981 
Symbol 
ID3567270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4279447 
End bp4279917 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content63% 
IMG OID637682454 
ProductHupJ protein 
Protein accessionYP_287178 
Protein GI71909591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT GGACGACCGA TCCGTCGCCA GAACTGGTTG CTGTTTTCGA TAATATCGCC 
CGGACACGAA TGCACGATGT GCCGATCTGC AACGGGAAAC TGCAGGTCGA GGCAGTCGGT
TTTCAGCGGA CTGCCGATGG CCACTGGGCG GGGGCGATGA TCACGCCGTG GGCGCTCAAC
CTGCTCCGCC TTCCCGCTCA GGTCGATGGC TGGCCGGTGT TGGCGGCGTG TAGCAAGCAC
GACTGGCATT TCCCGTCCGG CAACTACGAA TTCACAGTGG CTGAGGAGGC CAGCATCGGC
AACTATCATC TCTGCTCGCT GTTCTCGCCG GCGCTGGAAT TCGAGAGTCA CGAGGCGGCC
CGCCTGACTG CGCTGGCTGC CGTCCATGCC CTGTTTGGCG AGCCGCTGGT GGCGCCTGAC
GCAGCTGCCA AGCCCGCCAG TCGTCGTGCT TTTCTGGGGC TGGGTCGATG A
 
Protein sequence
MKVWTTDPSP ELVAVFDNIA RTRMHDVPIC NGKLQVEAVG FQRTADGHWA GAMITPWALN 
LLRLPAQVDG WPVLAACSKH DWHFPSGNYE FTVAEEASIG NYHLCSLFSP ALEFESHEAA
RLTALAAVHA LFGEPLVAPD AAAKPASRRA FLGLGR