| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3975 |
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| Symbol | |
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| ID | 3567474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4272270 |
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| End bp | 4273841 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637682448 |
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| Product | GGDEF |
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| Protein accession | YP_287172 |
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| Protein GI | 71909585 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 0.456822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCG AACGCACGCC AATCTCCGCG TCCCGCTTGC CGGTATTCCT GCCCTGGCTG
ATTCTGGCGG TCACGCTCGC TCTGACCTGG CTGGTCTGGG ATCACGAACG CCAGCTGGCG
CGCAAGGAAC TGCGTACCCA ATTCGATTTT GTGCTGCGCG AAACGGTCAG CCGGGTTGAG
CAGCGTGTGG CCGGGTACGA ACAGATGCTG CGTGGTGTTC AGGGTTTGTT TGCAACCACC
GCGCTGACGA ATCGCCGCGC TTTATGCGAT TACGTCGAGA CCTTGCAACT GGATGCCAAT
TTTTCGGCGA TCCAGGTCAT TGGCGTCATC GAGCAGGTTC CCCTGGCGAG CAAATCCGCC
CATGAGGCAA GGATGCAGCA GCTCGGCTTC ACGGGTTACG CGATTCATCC CGAAGGTGAG
CGAGAGGTCT ATGCCCCGAT CATCCAGCGT GAACCTGACG CTGGAGGCAA ACACTCCATC
CTTGGCCTTG ACCCGTGGGC AGATCCGGCG CGCCGGGTGG CCATGGAGGC GGCCCGCGAT
TCCGGCATGG CGGCAATCAC CGGCAAGGTC AGGTTGGCGA TCGATCGGCG GCAAGAGGCG
CAGCCGGGCT TCATCATGTA TCTGCCGATT TTTGCCCACG GCCAGCCGCG CGACAGCGTC
GCCCAGCGCA GAGCCAACCT CATTGGCTGG GTTTACGCAT CGTTCTACAT GGATGAATTC
ATGGCCGGCC TTTATGGCAA ACAGGCTCCG GGTATCACAC TGGCTATTTA CGACGAGGCC
AACCCCGTTG AGGCGGCGCT CATGTATCGA ACCGGTAACT CCTCTGACAA GGGTTTGCCT
GCCATTGAGA GCTTGCTCAG CGCCAACGAA TACATGGTGG TTGCCGGTCA CACCTGGACG
CTGAGCTTGA GTACGCAACG TGAATTCGAG GCCTGGTATG GCCGTGACGT GTCATCGGTC
ATTGCCGTTA CCGGCGCCGG CCTGGGCGTT GCACTGGCGT TGCTTGCCTG GCTGATGGTG
ACCGGTCGTG CTCGCGCCTT GCGGATGGCT GCAGAGATGA CCGAGGAACT TCGGCATATG
GCACAGCACG ATCCGCTGAC CGGGTTGCCA AACCGGGCCC TGTTCAGTGA CCGGTTGCAC
AAGGAACTGG CTCGCGCCAA GCGCCATGAT GGACAGTTTG CGCTGGTGTT TCTCGATCTC
GATCACTTCA AGCCGATCAA TGATAACTAC GGTCATGCCA TCGGGGATCT CGTGCTCCAG
CAAGTGGCGC TACGCTTGAA GGATACCGTT CGTGAGTCTG ATACGGTGGG CAGAATCGGT
GGCGACGAAT TCGTTGTGCT GGTGCCGGAA TTGGCTGAAT CAGACGCTGC GCTCAGTCTG
GCCGAGAAGA TTCGCCAGGT CATTCGGCAG CCCTTCGCGC TTGATGGCCG TCAATTGGAT
ATTTCGTGTA GCTTGGGGGT CGCCATCTAT CCGGATGACG GCATCGATGA GATCTCGTTG
ACCAAGAGAG CTGACGAAGC CATGTATCGC GCCAAGGATG ATGGTCGAGA CAGCGTTCGG
CGAGCAAGTT GA
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| Protein sequence | MASERTPISA SRLPVFLPWL ILAVTLALTW LVWDHERQLA RKELRTQFDF VLRETVSRVE
QRVAGYEQML RGVQGLFATT ALTNRRALCD YVETLQLDAN FSAIQVIGVI EQVPLASKSA
HEARMQQLGF TGYAIHPEGE REVYAPIIQR EPDAGGKHSI LGLDPWADPA RRVAMEAARD
SGMAAITGKV RLAIDRRQEA QPGFIMYLPI FAHGQPRDSV AQRRANLIGW VYASFYMDEF
MAGLYGKQAP GITLAIYDEA NPVEAALMYR TGNSSDKGLP AIESLLSANE YMVVAGHTWT
LSLSTQREFE AWYGRDVSSV IAVTGAGLGV ALALLAWLMV TGRARALRMA AEMTEELRHM
AQHDPLTGLP NRALFSDRLH KELARAKRHD GQFALVFLDL DHFKPINDNY GHAIGDLVLQ
QVALRLKDTV RESDTVGRIG GDEFVVLVPE LAESDAALSL AEKIRQVIRQ PFALDGRQLD
ISCSLGVAIY PDDGIDEISL TKRADEAMYR AKDDGRDSVR RAS
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