Gene Daro_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3973 
Symbol 
ID3567472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4269729 
End bp4270784 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content63% 
IMG OID637682446 
Producthydrogenase 2 protein HybA 
Protein accessionYP_287170 
Protein GI71909583 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.253471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAA GACGTGATTT TTTGCGTGGT TGCCTGGCCA GCGGCGCAGC GGCGGCTTCG 
GCCGTTCTGC CCGAGACAGC CTGCGCCCGC GATACCCTGA AACGCCCGCC GGAAGGCCTT
GGTCTGCTCT ACGACGCGAC CCTGTGCGTC GGCTGCCAGG CCTGCGTGGC TGCCTGCAAG
CAGGTCAATG AAAACCCGGC CGAATTCACG GCCATGGACA AGTTGTGGGA TACGCCGCTC
GATACGACCG GCCACACCTT CAACCTGATC AAGATGTACC GCAACGGTAC GATGGAAACC
AAGGACAGCG AGCTGAACGG CTTCTCCTTC ATGAAGACCT CGTGCATGCA TTGCGCCGAC
CCGTCCTGCG TCTCGGCCTG CCCGGTGTCG GCGATGACCA AGAATCTTGA AACCGGCATC
GTCGGCTACG ACCCGGACGC CTGTATCGGC TGCCGTTACT GCGTCGCCGC CTGCCCGTTC
GGTATTCCGA AATACCAGTA CGACTCGCCG ACCGGCAAGA TCGGCAAGTG CGAGCTGTGC
CGGCATCGCC ACAAGGACGG CCATTACTCG GCCTGCGCCG AGGTTTGTCC GACCGGCGCG
ACCTTGTTTG GTCGGACCGA GGACCTGCTG GCCGAAGCCA AGCGTCGTCT GGCCCTGAAG
CCGGGTGAAT GGACGACGAT TCCGCGCGGC CGCCTGCGCC CCGCCCAGGA GAAGGTGCTG
GCTGGCGGCG AGGATGGCAA GGGCCAGAAG CATCGTCATG GCTGGCGCGA CGAACCGGAC
CAGAGCTATC AGGCCCAAGT CGGTAACTAC CTGCAGCACG TCTATGGCGA GACCGAATAC
GGCGGCACGC AGGTACTCAA GCTGTCGGCC GTCAATTTCC AGAAAGTCGG CCTGCCCGAC
CTGCCGCCGA AATCCTCGGC CGCCACCTCG GAAACCATCC AGCACACGCT GTACGGCGGA
CTGATCATGC CGATTGCCGT ACTTGCCGGC CTGACCTGGG TTGCCAAGCG CAATGTCGTG
CCGGAAGACG ATGACCAGAA GGGAGGCAAG TCATGA
 
Protein sequence
MTTRRDFLRG CLASGAAAAS AVLPETACAR DTLKRPPEGL GLLYDATLCV GCQACVAACK 
QVNENPAEFT AMDKLWDTPL DTTGHTFNLI KMYRNGTMET KDSELNGFSF MKTSCMHCAD
PSCVSACPVS AMTKNLETGI VGYDPDACIG CRYCVAACPF GIPKYQYDSP TGKIGKCELC
RHRHKDGHYS ACAEVCPTGA TLFGRTEDLL AEAKRRLALK PGEWTTIPRG RLRPAQEKVL
AGGEDGKGQK HRHGWRDEPD QSYQAQVGNY LQHVYGETEY GGTQVLKLSA VNFQKVGLPD
LPPKSSAATS ETIQHTLYGG LIMPIAVLAG LTWVAKRNVV PEDDDQKGGK S