| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3970 |
|---|
| Symbol | |
|---|
| ID | 3567469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 4266291 |
|---|
| End bp | 4266770 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637682443 |
|---|
| Product | HybD peptidase |
|---|
| Protein accession | YP_287167 |
|---|
| Protein GI | 71909580 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCG TCGTATTGGG AATTGGCAAC ATTCTGCTGA CCGATGAGGG GGTCGGTGTT
CGCACCATCG AGGCGCTGGA GCGCGACTAC GTGCTGCCGC CGGAGGTCGA GCTCATCGAC
GGCGGCACCT GCGGCATGGA AATGCTCGAA CAACTGGAAA ACCTCGACGG CCTGATCGTC
GTCGACTGCG TGCGCTGCAA GCAGCCGCCA GCGACGCCGG TGCTGCTCAA GGGCGACGAT
GTGCCAATCT TCTTCAAGAC CAAGCTGTCG CCGCATCAGG TCAGCCTGTC CGACGTACTG
GCCAGTCTGG AATTTACGGA CAAGGCACCG AAGTCGATTG CTATCGTCGG CATGCAGCCG
GTATCGATGA GTCTGGGCAT GGAACTGTCG CCAGAGGTGG CGGCGCGGGT GCCGGAATTG
ATCGAAATGA CGCTGGCCGA ATTGCGCCTG CTCGGCATCG ACGCCAAGGC GCGCAGCTGA
|
|---|
| Protein sequence | MRIVVLGIGN ILLTDEGVGV RTIEALERDY VLPPEVELID GGTCGMEMLE QLENLDGLIV
VDCVRCKQPP ATPVLLKGDD VPIFFKTKLS PHQVSLSDVL ASLEFTDKAP KSIAIVGMQP
VSMSLGMELS PEVAARVPEL IEMTLAELRL LGIDAKARS
|
|---|
| |