| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3960 |
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| Symbol | |
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| ID | 3567459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4257038 |
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| End bp | 4258456 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637682433 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_287157 |
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| Protein GI | 71909570 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCC TCATCGTCGG GCCGTTCAAC CGGGTCGAAG GCGATCTCGA AATCAGCCTC
GATGTGGAAA ATGGACGCAT CCAGTCGGCT CAGGTCAATT CGCCGCTCTT TCGCGGTTTC
GAGCAGATCA TGGTTGGCCG GGCCCCGCTT GATGCATTGG CCATCGTGCC GCGCATCTGT
GGTATTTGCT CGGTGGCACA GTCGGCGGCA GCGGCTTCGG CGCTGGCCGA TGCGATGGGT
ATCGCCCCGA CGCCGAACGG GTTGCTCGCC CGCCATCTGA TCCAGTCGAC GGAAAATCTG
GCCGATCACC TGACGCACTT CTACCTCTTT TTCATGCCCG ACTTTGCCCG TCCGGCCTAT
GCCGGGCGCC ACTGGCATGG CGCTGTCGCC CAGCGCTTCG CGGCCGTCAA GGGTGATGCC
ACTGCCGAAG TCCTGTCGGC CCGCGCCAGC TTCCTCAAGC TGATGGGTTT TCTCGCCGGT
CGCTGGCCGC ACACCCTGGC CATTCAGCCC GGTGGCAGCA CGCGGGCGAT CACTGCTGGC
GAGCGTATTC GCCTGCTGGC GCTGCTCCGC GAATTCCGTA GCTTTCTCGA AAAACGCCTG
TTCGGCGATT CGTTGGCCAC GGTCTCCCAA CTGGCCAGCA AAGATCAATT GCTCGCCTGG
GCCGCCGGCC GTGCTGGTGA CTTCCCGGCG TTTCTGGATG CCGCTACCGA TCTTGGTCTC
GACCGGATGG GAAGCGCCTA CGATGCTTTC CTGTCCTATG GCGCCTACGA TCTCTTTCCC
GCCGGCACCT GGCAAGGCGG TCAAGCGGCT GCCTTCGATC CCGTGGCGAT CGATGAAGAC
ACGACCAGCG CCTGGCTGGC TGCCGGCCAG CCGCGCCATC CGGCGCAGGG TGAAACGGTT
GTCGATGCCG GCAAGCCGGC GGCCTACACC TGGTGCAAGG CACCGCGCTA CGCCAGCCAG
CCCTACGAAG TCGGTGCGTT GGCCAGGCAG GTCATCGCCG GTCACCCGCT GGCGTTGGAT
CTGGTACAAC GCGACGGCGC CAGCGTCATG GCTCGCGTCG TTGCACGCCT GCTCGAACTG
GCCCTTGTCC TGCCCGCCAT GGAAGGCTGG GTTCTGGCGC TACAACCCGG CGAAGCCTTC
TGCGCCCACG GCGATATGCC CGATGACGCC ACTGGCACCG GCCTTGTCGA AGCCGCCCGC
GGCAGCCTCG GCCACTGGCT GAGCATCAAG CGTGGCCGCA TCGAGCGCTA CCAGATCATC
GCCCCGACCA CCTGGAACTT CTCGCCGCGT GATGGCAACG CCCTGCCCGG TCCGCTCGAA
CAGGCACTGG TCGGCCTGCC GGCCGGAGAG GGCGCCCCGC CAACCGTGCA GCACGTCGTG
CGGTCGTTCG ATCCTTGCAT GGTCTGTACC GTGCATTAG
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| Protein sequence | MTRLIVGPFN RVEGDLEISL DVENGRIQSA QVNSPLFRGF EQIMVGRAPL DALAIVPRIC
GICSVAQSAA AASALADAMG IAPTPNGLLA RHLIQSTENL ADHLTHFYLF FMPDFARPAY
AGRHWHGAVA QRFAAVKGDA TAEVLSARAS FLKLMGFLAG RWPHTLAIQP GGSTRAITAG
ERIRLLALLR EFRSFLEKRL FGDSLATVSQ LASKDQLLAW AAGRAGDFPA FLDAATDLGL
DRMGSAYDAF LSYGAYDLFP AGTWQGGQAA AFDPVAIDED TTSAWLAAGQ PRHPAQGETV
VDAGKPAAYT WCKAPRYASQ PYEVGALARQ VIAGHPLALD LVQRDGASVM ARVVARLLEL
ALVLPAMEGW VLALQPGEAF CAHGDMPDDA TGTGLVEAAR GSLGHWLSIK RGRIERYQII
APTTWNFSPR DGNALPGPLE QALVGLPAGE GAPPTVQHVV RSFDPCMVCT VH
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