| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3946 |
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| Symbol | |
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| ID | 3567484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4243617 |
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| End bp | 4244963 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637682420 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_287144 |
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| Protein GI | 71909557 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATTA CCGTCCCGCC CGCTGATCTG TCGACGGAAT CGCCGCTGCC GCCGGGCGGG
GAGCAGGCCT GGATCGAAGT CATCCAGAAG ATGGATGAGG TCTACAACGA CCTCCTCCAG
TACGAAGTCG CCCTCGAAGA GAAAAACGCC GCGCTCGAGG AGTCGCATCA GTTCATCGAG
AGCGTGCTTG CCTCGATGTC GGACATCCTG ATCGTGTGCG ACCGCAATGG TGGCATCGAG
GAGGTGAATT CCTCGCTCCA GCATTTCTCC GGCAAGACGG CCGGCGAACT GGAAAAGACA
CCGGTTTTCG ACCTGTTTGC CGACGACGTC GAGCGGGGCA AGGCGCGCGA AATCTTCTCG
CGTTTCGGCC GCGAAGGCGT CCATGACTGC GAGTTTTTCC TGCGTGCCGG CGATGGTTCG
ACCGTGCCAG TGTCGATGAA CTGCACGCCG CGTCTATCGC AGACCGGCAA GCTGATGGGC
ATGGTCGTCA CCGGTCGGCC GGTCGGCGAA CTGCGCCGTG CTTATTCCGC CCTGCGTCAG
GCCCACGATG ATCTGAAACG GACCCAGGGC CAATTGCTGC ACGCCGAGAA AATGGTTTCG
CTTGGTCGGC TGGTCGCCGG TGTGGCGCAC GAGCTGAACA ACCCGATCAG TTTCGTGCTG
GGCAATGTGT TGTCGCTGAA GCGCTACGCC AGCCGCCTGG AAAGCTATCT CGCTGCGGTG
CATGCCAGCG ATGCCGCAGA CGATGAGGCG CTCAAGGCCA TGCGCGAGGC GTTGCGCATC
GATCGTATCC TGGCCGACAT GCCGCACCTG ATCGACGGCA TGATCGAAGG GGCGGAGCGG
ACCCGCGATA TCGTCGATGC CCTGAAACGC TTTTCGGCGG TGGACAAGAT GACGTCGGAA
CGGGTCAGCC TCAACGACGT GGTCGAGCGC TCGGTCCGCT GGGTGGTGCA AAGCGCCCCG
GCCAAGTTTG TGGTCGATAT CGATTTGCCG CCGGATCTAC GCTGCTCCGG CTCCTCCGGC
CAGTTGCAGC AGGTGGTGAT GAATCTGGTG CAGAATGCCA GCGATGCGCT GGCCAATCGG
GCCGACGCCC GACTCCAGGT CAGCGGTAGC GTCGAAAACG CCATGGCGGT ATTGCGCTTT
ACCGACAACG GCCCGGGGAT CCCCGAGGAA CACCTGAGCC GCCTGTTCGA ACCCTTCTTC
ACCACCAAGC CGGTTGGTCA GGGCACGGGG CTGGGCTTGT CGATCAGCTA CGGCATCGTC
GAACGGCATG GTGGCAAGCT GAGCGCCGGC AACGTGCCGG GCAACGGGGC GGAATTCATC
CTTGCACTTC CGGTGGAAAG CCGCTGA
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| Protein sequence | MSITVPPADL STESPLPPGG EQAWIEVIQK MDEVYNDLLQ YEVALEEKNA ALEESHQFIE
SVLASMSDIL IVCDRNGGIE EVNSSLQHFS GKTAGELEKT PVFDLFADDV ERGKAREIFS
RFGREGVHDC EFFLRAGDGS TVPVSMNCTP RLSQTGKLMG MVVTGRPVGE LRRAYSALRQ
AHDDLKRTQG QLLHAEKMVS LGRLVAGVAH ELNNPISFVL GNVLSLKRYA SRLESYLAAV
HASDAADDEA LKAMREALRI DRILADMPHL IDGMIEGAER TRDIVDALKR FSAVDKMTSE
RVSLNDVVER SVRWVVQSAP AKFVVDIDLP PDLRCSGSSG QLQQVVMNLV QNASDALANR
ADARLQVSGS VENAMAVLRF TDNGPGIPEE HLSRLFEPFF TTKPVGQGTG LGLSISYGIV
ERHGGKLSAG NVPGNGAEFI LALPVESR
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