Gene Daro_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3936 
Symbol 
ID3567667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4231717 
End bp4232790 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content60% 
IMG OID637682410 
Producthypothetical protein 
Protein accessionYP_287134 
Protein GI71909547 
COG category 
COG ID 
TIGRFAM ID[TIGR02098] MJ0042 family finger-like domain 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.00733105 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGCC GGGATCAAGC CCTGATGCGG ACCCGCTGCC CGGATTGCGG CACGGTTTTC 
CGGGTCACGT CCGAGCAGTT GCGTCGCAAG GCCGGCAAGG TCCGTTGTGG ACATTGCCAG
TCGGTCTTCA ATGCGTTTGA TCAATGGCTA TCTGACACCG ACGAGCCGGA AGTCAATTCA
CCGCCTCCTG AGGAAGAAGC TTCGCTAGTC GAGCAACTGC AGACGGAGCC GGAAGCTGCT
CTTGAAGAGC TAGCAGTCGA ACCTGAGCCG GAGTTGGCGG AGCAGGTTGA TACTCTGGTC
GAAGAGCCAT TTGAAGAAGT TATTGAAGTC CTGCCGCTTG AGATCATCGA CAGCGAAGTG
CCTGCCGAGC CCAATGCACT GACAGCGCCT GGCGAGTCCG AGCCCGAAAG CGTGCCGGGG
AGTGAACTGC AAGCCCCATG CGACGACACG TTGCCGGAAG ATAGCCAGGA AACCCCCGAA
GAGTCGACCC AGGCGGCGCG TGACGCCGGC CTCGTTGCGG CACGGGAACT GAACGATACG
ACGGCCTACA ATCGCTGGGC TGCCGGTACG CTGGCCAGCG ATGGATTGGG TGGCTTCGCC
AGTGAGTCGG CCAAGCGGGC GGTCTGGCCT TTCGTGCTGG TCTCGATTCT GTTGATCGTC
GCCCTGCTTG GGCAATTGCT TTACTACTTC CGCAGTGAGA TCGTTTTGCG GATGCCAAGT
GCGGCGTCTC TGTATCAGCT GGTTTCGGTC GACATTCCGC TACCGCGTAA TCCGGCCCTG
GTTTCCATTG AAACCTCCGA TCTGCAATCC GATAACGCCC GTGGCCTGTT CGTGTTGCAG
GCGACCCTGA AAAACCGGGC CGATCACCCC CAGGCCTGGC CAGCGCTTGA GCTGAGCCTG
ACCGATACCA ACGATTCCGT TGTTTCCCGA CGGGTCATGT ACGCTGCCGA ATACTTGCCG
CCCGGCACGG CTTCCGATCA TTTCCCGGCC AACGGCGAAG TTGCTGTCCG ACTATGGATC
GAGGCCAAGG AAATCGGCGC CTCCGGCTAT CGCCTTTACA TCTTCTATCC CTGA
 
Protein sequence
MSGRDQALMR TRCPDCGTVF RVTSEQLRRK AGKVRCGHCQ SVFNAFDQWL SDTDEPEVNS 
PPPEEEASLV EQLQTEPEAA LEELAVEPEP ELAEQVDTLV EEPFEEVIEV LPLEIIDSEV
PAEPNALTAP GESEPESVPG SELQAPCDDT LPEDSQETPE ESTQAARDAG LVAARELNDT
TAYNRWAAGT LASDGLGGFA SESAKRAVWP FVLVSILLIV ALLGQLLYYF RSEIVLRMPS
AASLYQLVSV DIPLPRNPAL VSIETSDLQS DNARGLFVLQ ATLKNRADHP QAWPALELSL
TDTNDSVVSR RVMYAAEYLP PGTASDHFPA NGEVAVRLWI EAKEIGASGY RLYIFYP