| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3921 |
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| Symbol | |
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| ID | 3567652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4215811 |
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| End bp | 4217727 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637682395 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_287119 |
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| Protein GI | 71909532 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA CCGAACAATT CCTCGCCGCC AACGCCCACG TCGACGAGGC TGCAGTCCAG
CCGCTGCCCA ATTCCCGCAA AATCTACGTT GAAGGTTCGC GCCCGGATAT TCGGGTGCCG
ATGCGCGAAG TGTCGCAGGA CGACACGCCG ACCGCCTTCG GTGGAGAAAA GAACCCGCCG
ATCTACGTCT ATGACTGCTC CGGCCCCTAT TCCGACCCGG CCGCCAAGAT CGACATCCGT
TCCGGCCTGC CGGCGCTGCG TGCCCAGTGG ATTGCCGAGC GCGGCGATGT CGAGGCGCTG
GCCGATTTGA GTTCCGAGTT CGGCCGCCAG CGTGCCGCCG ACCCAAAACT CGACGAACTG
CGCTTCCCCG GCCTGCACCG CAAGCCGCTG CGCGCCAAGG CCGGTCAGAA CGTTTCGCAG
ATGCACTACG CCCGCCGGGG CATCATCACG CCGGAGATGG AATACGTCGC CATCCGCGAG
AACAACAACC GCCGCGCTTA CATTGAAAGC CTGAAGGCCA CCGGCCCGAT GGGTAACCGG
ATGGCCGACA TTCTCGGCCG CCAGCACAAG GGCCAGGATT TCGGCGCCAG CATTCCGGAA
GAAATCACCC CGGAATTCGT CCGCAGCGAA ATCGCCCGCG GCCGCGCCAT CATCCCGAAC
AACATCAACC ACCCGGAAAG CGAGCCGATG ATCATCGGCC GCAATTTCCT GGTCAAGATC
AATGCCAACA TCGGCAACTC GGCGCTCGGC TCCTCGATTC AGGAAGAAGT CGAAAAGATG
ACCTGGTCGA TCCGCTGGGG CGGCGACACG GTGATGGACC TGTCCACCGG CAAGAACATT
CACGAAACGC GTGAATGGAT CATCCGTAAC AGCCCGGTGC CAATCGGCAC GGTGCCGATC
TATCAGGCGC TGGAAAAGGT TAACGGCAAG GCCGAAGACC TGACCTGGGA AATCTTCCGC
GACACACTGA TCGAACAGGC CGAACAGGGC GTCGACTACT TCACCATCCA CGCCGGCGTC
TTGCTCCGCT ATGTGCCGAT GACCGCCAAC CGCCTGACCG GCATCGTTTC CCGCGGTGGC
TCGATCATGG CCAAGTGGTG TCTGGCCCAT CACAAGGAAA GCTTCCTCTA CACGCATTTC
GAGGAAATCT GCGAAATCAT GAAGGCCTAC GACGTCGCCT TCAGCCTCGG CGACGGCCTG
CGTCCCGGTT CTATCTACGA TGCCAACGAC GAAGCGCAAC TCGGCGAATT GGAGACGCTG
GGCGAACTGA CCAAAATTGC CTGGAAGCAC GACGTTCAGG TCATCATCGA AGGCCCGGGT
CATGTGCCGA TGCACATGAT CAAGGAAAAC ATGGACCTCC AGCTCAAGCA TTGCGACGAA
GCTCCGTTCT ACACCCTCGG TCCCTTGACC ACCGATATTG CACCGGGCTA CGACCACATC
ACCAGCGGCA TCGGTGCCGC GATGATCGGC TGGTACGGCA CTGCCATGCT CTGTTACGTC
ACGCCGAAAG AGCACCTTGG CCTGCCCGAC AAGGATGACG TCAAGGAAGG CATCATCACC
TACAAGCTCG CCGCCCACGC CGCCGACCTC GCCAAGGGCC ATCCCGGCGC GCAGATCCGC
GACAACGCGC TTTCCAAGGC ACGCTTCGAA TTCCGCTGGG ATGACCAGTT CAACCTCGGC
CTCGACCCGG ACAAGGCGCG CGAATTCCAC GACGAAACCC TGCCCAAGGA ATCAGCCAAG
GTCGCTCACT TCTGCTCCAT GTGCGGCCCG CACTTCTGTT CGATGAAGAT CACCCAGGAA
GTCCGGGAGT TCGCTGCACA GCAAGGGCTG GATGAAGCGG CTGCCCTGGA GAAGGGGATG
GAAGTGAAAT CGGTTGAGTT TGTGAAGGCC GGCGCTGAGG TTTATAGCAA GATCTAA
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| Protein sequence | MNATEQFLAA NAHVDEAAVQ PLPNSRKIYV EGSRPDIRVP MREVSQDDTP TAFGGEKNPP
IYVYDCSGPY SDPAAKIDIR SGLPALRAQW IAERGDVEAL ADLSSEFGRQ RAADPKLDEL
RFPGLHRKPL RAKAGQNVSQ MHYARRGIIT PEMEYVAIRE NNNRRAYIES LKATGPMGNR
MADILGRQHK GQDFGASIPE EITPEFVRSE IARGRAIIPN NINHPESEPM IIGRNFLVKI
NANIGNSALG SSIQEEVEKM TWSIRWGGDT VMDLSTGKNI HETREWIIRN SPVPIGTVPI
YQALEKVNGK AEDLTWEIFR DTLIEQAEQG VDYFTIHAGV LLRYVPMTAN RLTGIVSRGG
SIMAKWCLAH HKESFLYTHF EEICEIMKAY DVAFSLGDGL RPGSIYDAND EAQLGELETL
GELTKIAWKH DVQVIIEGPG HVPMHMIKEN MDLQLKHCDE APFYTLGPLT TDIAPGYDHI
TSGIGAAMIG WYGTAMLCYV TPKEHLGLPD KDDVKEGIIT YKLAAHAADL AKGHPGAQIR
DNALSKARFE FRWDDQFNLG LDPDKAREFH DETLPKESAK VAHFCSMCGP HFCSMKITQE
VREFAAQQGL DEAAALEKGM EVKSVEFVKA GAEVYSKI
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