| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3919 |
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| Symbol | |
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| ID | 3567650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4213473 |
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| End bp | 4214942 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637682393 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_287117 |
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| Protein GI | 71909530 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 68 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATACC TATCGTTTTC AAGGGTGCCG ACGTGTTGCC TGTCGCTTGC CGTTTTAATG
AGCGCAGGCC TGTTGAGTGC CTGCACCGGG CTGCCTTCGC TTGGCCCGGA TTATCAGGCG
CCGGCCTGGA CGATGCCGAA TCGCTGGCTG GCCGCAAAGC CGGCGGCTAC CAATTCGGCG
CTCAAACAGG GCGTTGATCT GAAAATTGAT TCCGTCTGGT GGCGGCAACT GGGCGATCCG
GCGCTTGATG CCTTGATCGC CGTCGCCCAG TCCGGCAGCC TCGATCTCAA GGCGGCGCAG
GCTCGCTTGC GGCAGGCGCG GGCCAGTCGG GCGCAGGTGG TGAGCGGTTA TTTTCCGCAA
GTGTCGGCGT CGACTGGCGC CAGCCGGACG AAGAACGCCA CGGCAGTCAG CACCCTGCCG
ACCCGCACGC TGTACGACGC CGGTTTCGAC GCCAGTTGGG AGCTTGATCT TTTCGGCGGC
ACGCGGCGGG CGGTCGAGGC GGCGAGTGCC GATCTGGCGG CGAGCGAGGC CAGTCTGGAA
AACGTGCAGG TGTCGCTGCT TGCCGAAGTG GCGCAGAACT ATGTTGAGTT CCGCGCTTAC
CAGTCGCGGC TGGTAATTGC CCGGGCCAAT CTGGCCAGCC AGACCGAAAC GGCGCAGATC
ACTGAATGGC GTGAGCAGGC TGGGCTGGCC AGCAACGCTG ATGTCGAGCA GGCGCGGACC
AGCCGCGAGC AAATGCGGGC CGGCATGCCG GATCTTGAGG TCGGGCTGGC GGCGGCGGAA
AACCGGCTGG CGACCTTGCT TGGCCGGCAA CCTGGCGCCC TGCATGAACA GTTGTTGGCC
GCGCAGTCCC GGCCGGTGGC GCCGCCGACG GTGGCGACCG GCATCCCGGC CGATGTGCTA
CGTCAGCGGC CCGATCTGAT CGTTGCCGAG CGCACGCTGG CGGCGGAAAC GGCGCGTATC
GGGCAGCGAC AGGCGGCGCG CTTTCCCAGC CTGTCGCTGG GTGGCTCGTT CGGCTGGCAG
GCTTACAGCC TCGGCGCGCT GGGCGGCAGT GCCAGCTTGG TGCGTGCAGC GAGCGGCACG
CTGGCGGCAA CCTTGTTTGA CGGCGGCAAG CTGCGCAGCG CAGTGGAGTT GCAGACGGCG
GTGCAGGAAG CGGCGCTGGT GGCTTACGAG AGCGCCGTGT TGACTGCGCT GGAAGAGGTC
GAAAACGCGC TGACCGCCCA TGCGCAGGCC CGCGATCGGG TGGTCGCCCG TGAAGCGGCG
GCCTTCTCGG CGCGCAACGC GGCGACGTTA AGCCGACAGA TGTACGAAGC CGGCCTCGCC
GACTTCCAGA AAGTGCTGGA AACCCAGCGC ACCCAATTGA CGGCCGAGGA TTCGCTGGCC
ACCGCCCAGT CGGCGGTGCT GACCACGCTG ATCCAGCTCT ACAAGGCGCT TGGCGGCGGT
TGGTCGGCCT ATGAAAGTGA TCGAACATGA
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| Protein sequence | MRYLSFSRVP TCCLSLAVLM SAGLLSACTG LPSLGPDYQA PAWTMPNRWL AAKPAATNSA
LKQGVDLKID SVWWRQLGDP ALDALIAVAQ SGSLDLKAAQ ARLRQARASR AQVVSGYFPQ
VSASTGASRT KNATAVSTLP TRTLYDAGFD ASWELDLFGG TRRAVEAASA DLAASEASLE
NVQVSLLAEV AQNYVEFRAY QSRLVIARAN LASQTETAQI TEWREQAGLA SNADVEQART
SREQMRAGMP DLEVGLAAAE NRLATLLGRQ PGALHEQLLA AQSRPVAPPT VATGIPADVL
RQRPDLIVAE RTLAAETARI GQRQAARFPS LSLGGSFGWQ AYSLGALGGS ASLVRAASGT
LAATLFDGGK LRSAVELQTA VQEAALVAYE SAVLTALEEV ENALTAHAQA RDRVVAREAA
AFSARNAATL SRQMYEAGLA DFQKVLETQR TQLTAEDSLA TAQSAVLTTL IQLYKALGGG
WSAYESDRT
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