| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3918 |
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| Symbol | |
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| ID | 3567706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4212175 |
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| End bp | 4213476 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637682392 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_287116 |
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| Protein GI | 71909529 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 64 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA GTACGGATTC CCAAAGCGCG GATACCTCGT CGGCGGCGCT CGTTGCGCTG
CTCAGCAAGA ATGCCAACCA GGGCAGCGGC CGGCGACGGC TGTGGCTGAT CGGCGGCGGC
ATTGCCGTCG TGGCTGTGCT GCTGGTGGTT TTGTCCGGCG GCAATGGCCA GCCTGCCGGG
CAGTTTCTGA CCGAGGAGGC GGTTCTCGGC AACCTGCTGG TCACCGCCTC GGCCAGCGGC
ACGCTGCAGC CGACCAAGTC GGTCGATGTC GGCTCCGAGC TTTCCGGTAC CTTGGCCAGC
GTGCTGGTGC AGGAAAACGA TGTGGTCAAG AAAGGCCAGT TGCTGGCTCA GCTCGACACC
GCCAAATTGA AGGACGCCGT GGCCAAGTCG CAGGCCGCCG TGGCTGCGGC GGAGGCCTCG
GTGGCGCTGG CGCAGGCGAC GGTGGCTGAA ACGACGGCCT CGCTGAATCG CATGCGCCAG
GTCGCCGAGC TTTCCGGCGG CAAGGTGCCG GCCAAGACCG AGCTGGAGAC GGCCGATGCG
GCGCGGCAAC GGGCCATCGC CACTCTGGCC AGCGCCCGGG CCGACGTCGT GCAGGCGCGG
GCGACGGCGA AAACGGATGA AACCAATCTC GGCAAGGCGA CCATCCGTTC GCCGGTCGAT
GGCGTCGTGC TGACCCGCAA GGTGGAGCCG GGCCAGACCG TGGTGGCGGC GATGACGACG
CCGGTGCTTT TCGTGCTGGC TGAGGATCTG GCCAAGATGG AACTGCAGGT CAAGGTCGAT
GAGGCCGATG TCGGCAATGT CAAAATCGGC CAGACGGCCA GCTTCACCGT GTCGGCCTGG
CCGGGGCGCA AGTTTCCGGC GAGCATCCAG CGCGTCGGGC TGGGTTCGAC GACGACCGAT
AACGTGGTCA CCTACAAGAC CATCTTGCGG GTCAATAACG ACGACCTCGC GCTGCGCCCG
GGCATGACGG CGACGGCCGC CATCGTCACG GCTAGCCGCG ACAAGGTGCT GCTGGTGCCC
AACGCGGCGC TGCGTTTTAC GCCGCCGGGC GAGGGGGCGG CGACGAAAGA GCGCGGCCTG
GTCGCCCGCC TGATGCCCGG CCCGCCGCCG GAGGCGCCGA AGAATCGCCC GGCTGCGGCC
AAGGGCAGCG GCGACGGGCA GGTCTGGGTG CTGGTCGATG GCCAGCCGCA GGCGGTGGCG
CTGAAAACCG GCGTCAGCAA CGGGCGCCTT ACCGAGGTGC TGGGCGGCGA TTTGCCGGTG
GGTGCGGCGG TTATTTCCGA CTATCAGGCG GCGAAAAAGT GA
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| Protein sequence | MTQSTDSQSA DTSSAALVAL LSKNANQGSG RRRLWLIGGG IAVVAVLLVV LSGGNGQPAG
QFLTEEAVLG NLLVTASASG TLQPTKSVDV GSELSGTLAS VLVQENDVVK KGQLLAQLDT
AKLKDAVAKS QAAVAAAEAS VALAQATVAE TTASLNRMRQ VAELSGGKVP AKTELETADA
ARQRAIATLA SARADVVQAR ATAKTDETNL GKATIRSPVD GVVLTRKVEP GQTVVAAMTT
PVLFVLAEDL AKMELQVKVD EADVGNVKIG QTASFTVSAW PGRKFPASIQ RVGLGSTTTD
NVVTYKTILR VNNDDLALRP GMTATAAIVT ASRDKVLLVP NAALRFTPPG EGAATKERGL
VARLMPGPPP EAPKNRPAAA KGSGDGQVWV LVDGQPQAVA LKTGVSNGRL TEVLGGDLPV
GAAVISDYQA AKK
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