Gene Daro_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3917 
Symbol 
ID3567705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4211340 
End bp4212038 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content65% 
IMG OID637682391 
ProductABC transporter related 
Protein accessionYP_287115 
Protein GI71909528 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCGC CCTTGATTGA ATTGCGCGGC ATCACCAAGA CCTACGGTCA GGGGCAGGCG 
GCGTTTCAGG CCCTGCGTGG CGTTGATCTG ACCATCGAAG CCGGTGAATT CGTGGCGGTG
ATGGGGCCGA GCGGTTCCGG CAAATCGACG GCGATGAACC TGCTCGGCTG CCTCGATACG
CCGACCTCGG GCGAATACCG TTTTCAGGGC ATCAACGTCG AGCAACTCGA CCGCAACCAG
CGGGCCTTGC TGCGTCGGCA ATGTCTTGGC TTCGTTTTTC AGGGCTTCAA TTTGCTGGCG
CGCACCTCAG CGCAGGAGAA CGTCGAGCTG CCTCTGCTCT ATCGCGGCGA ACCGGCCGCA
GTGCGCCACG CTGCGGCGCG GGCGGCTCTC GCCAAAGTCG GCCTCGACGG CTGGGAAACG
CACACCCCGG CCGAGCTTTC CGGCGGTCAG CAGCAGCGTG TCGCGATTGC CCGGGCCATT
GTCACCAACC CGCTGGTGCT GCTCGCCGAC GAGCCGACCG GCAACCTCGA CAGCAAGCGC
AGCCACGAGA TCATGGAGCT GCTCGGGCGG CTGAACAGCG AACAACGCAT CACCATCATC
ATGGTCACCC ACGAGCCGGA TATGGCGCAC TACGCGCGGC GCATCGTGCA TTTTGTCGAC
GGGTTGGTGG ACAGCGACAG CGCGACGGAG GCAGCATGA
 
Protein sequence
MSAPLIELRG ITKTYGQGQA AFQALRGVDL TIEAGEFVAV MGPSGSGKST AMNLLGCLDT 
PTSGEYRFQG INVEQLDRNQ RALLRRQCLG FVFQGFNLLA RTSAQENVEL PLLYRGEPAA
VRHAAARAAL AKVGLDGWET HTPAELSGGQ QQRVAIARAI VTNPLVLLAD EPTGNLDSKR
SHEIMELLGR LNSEQRITII MVTHEPDMAH YARRIVHFVD GLVDSDSATE AA