Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3917 |
Symbol | |
ID | 3567705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4211340 |
End bp | 4212038 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637682391 |
Product | ABC transporter related |
Protein accession | YP_287115 |
Protein GI | 71909528 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGCGC CCTTGATTGA ATTGCGCGGC ATCACCAAGA CCTACGGTCA GGGGCAGGCG GCGTTTCAGG CCCTGCGTGG CGTTGATCTG ACCATCGAAG CCGGTGAATT CGTGGCGGTG ATGGGGCCGA GCGGTTCCGG CAAATCGACG GCGATGAACC TGCTCGGCTG CCTCGATACG CCGACCTCGG GCGAATACCG TTTTCAGGGC ATCAACGTCG AGCAACTCGA CCGCAACCAG CGGGCCTTGC TGCGTCGGCA ATGTCTTGGC TTCGTTTTTC AGGGCTTCAA TTTGCTGGCG CGCACCTCAG CGCAGGAGAA CGTCGAGCTG CCTCTGCTCT ATCGCGGCGA ACCGGCCGCA GTGCGCCACG CTGCGGCGCG GGCGGCTCTC GCCAAAGTCG GCCTCGACGG CTGGGAAACG CACACCCCGG CCGAGCTTTC CGGCGGTCAG CAGCAGCGTG TCGCGATTGC CCGGGCCATT GTCACCAACC CGCTGGTGCT GCTCGCCGAC GAGCCGACCG GCAACCTCGA CAGCAAGCGC AGCCACGAGA TCATGGAGCT GCTCGGGCGG CTGAACAGCG AACAACGCAT CACCATCATC ATGGTCACCC ACGAGCCGGA TATGGCGCAC TACGCGCGGC GCATCGTGCA TTTTGTCGAC GGGTTGGTGG ACAGCGACAG CGCGACGGAG GCAGCATGA
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Protein sequence | MSAPLIELRG ITKTYGQGQA AFQALRGVDL TIEAGEFVAV MGPSGSGKST AMNLLGCLDT PTSGEYRFQG INVEQLDRNQ RALLRRQCLG FVFQGFNLLA RTSAQENVEL PLLYRGEPAA VRHAAARAAL AKVGLDGWET HTPAELSGGQ QQRVAIARAI VTNPLVLLAD EPTGNLDSKR SHEIMELLGR LNSEQRITII MVTHEPDMAH YARRIVHFVD GLVDSDSATE AA
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